RNA–Protein interactions for RNA: ENST00000593044.5

TMC6-224, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 3,070 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-224ENST00000593044 CRACR2AQ9BSW2 395 aa17.71■□□□□ 0.43
TMC6-224ENST00000593044 NUP58Q9BVL2 599 aa17.71■□□□□ 0.43
TMC6-224ENST00000593044 TMOD4Q9NZQ9 345 aa17.71■□□□□ 0.43
TMC6-224ENST00000593044 ATP9AO75110 1047 aa17.71■□□□□ 0.43
TMC6-224ENST00000593044 KNOP1Q1ED39 458 aaKnown RBP17.71■□□□□ 0.43
TMC6-224ENST00000593044 ZC2HC1CQ53FD0 456 aaPredicted RBP17.71■□□□□ 0.43
TMC6-224ENST00000593044 ANKRD13CQ8N6S4 541 aa17.71■□□□□ 0.43
TMC6-224ENST00000593044 COG1Q8WTW3 980 aa17.71■□□□□ 0.43
TMC6-224ENST00000593044 AGO4Q9HCK5 861 aaKnown RBP17.71■□□□□ 0.43
TMC6-224ENST00000593044 ZC3H4Q9UPT8 1303 aaKnown RBP17.71■□□□□ 0.43
TMC6-224ENST00000593044 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 CLIC2O15247 247 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 DHX15O43143 795 aaKnown RBP17.7■□□□□ 0.42
TMC6-224ENST00000593044 USP2O75604 605 aaPredicted RBP17.7■□□□□ 0.42
TMC6-224ENST00000593044 GGCXP38435 758 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 TMEM132BQ14DG7 1078 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 CCDC42Q96M95 316 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 PDCD2LQ9BRP1 358 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 PXMP2Q9NR77 195 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 UBIAD1Q9Y5Z9 338 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 EIF3CLB5ME19 914 aaKnown RBP17.7■□□□□ 0.42
TMC6-224ENST00000593044 DSG3P32926 999 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 KIF5AQ12840 1032 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 EIF3CQ99613 913 aaKnown RBP17.7■□□□□ 0.42
TMC6-224ENST00000593044 SELENOOQ9BVL4 669 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 MED4Q9NPJ6 270 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 SIK3Q9Y2K2 1263 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 SSC5DA1L4H1 1573 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 C19orf81C9J6K1 198 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 CLGNO14967 610 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 CETN3O15182 167 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 MOCS3O95396 460 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 HOXA7P31268 230 aaPredicted RBP17.7■□□□□ 0.42
TMC6-224ENST00000593044 B3GNT9Q6UX72 402 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 LRRC31Q6UY01 552 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 MSL3Q8N5Y2 521 aaKnown RBP17.7■□□□□ 0.42
TMC6-224ENST00000593044 ARHGAP20Q9P2F6 1191 aa17.7■□□□□ 0.42
TMC6-224ENST00000593044 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.7■□□□□ 0.42
TMC6-224ENST00000593044 COL11A1P12107 1806 aaPredicted RBP17.7■□□□□ 0.42
TMC6-224ENST00000593044 BCRP11274 1271 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 ICE2Q659A1 982 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 RETREG2Q8NC44 543 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 ACBD3Q9H3P7 528 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 ZNF214Q9UL59 606 aaPredicted RBP17.69■□□□□ 0.42
TMC6-224ENST00000593044 AFG3L2Q9Y4W6 797 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 ARHGEF35A5YM69 484 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 TMEM150BA6NC51 233 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
TMC6-224ENST00000593044 TUBBP07437 444 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 SLC7A5Q01650 507 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 VGLL4Q14135 290 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 EHBP1Q8NDI1 1231 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.69■□□□□ 0.421e-19■□□□□ 9.3
TMC6-224ENST00000593044 CEP63Q96MT8 703 aa17.69■□□□□ 0.42
TMC6-224ENST00000593044 SORBS3O60504 671 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 VAV2P52735 878 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 APBA1Q02410 837 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 CKAP4Q07065 602 aaKnown RBP17.68■□□□□ 0.42
TMC6-224ENST00000593044 NFRKBQ6P4R8 1299 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 CATSPERGQ6ZRH7 1159 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 EPM2AIP1Q7L775 607 aaPredicted RBP17.68■□□□□ 0.42
TMC6-224ENST00000593044 IFIH1Q9BYX4 1025 aaKnown RBP17.68■□□□□ 0.42
TMC6-224ENST00000593044 RABEP2Q9H5N1 569 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 PARVGQ9HBI0 331 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 NCK2O43639 380 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 PSEN1P49768 467 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 SPA17Q15506 151 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 REPS2Q8NFH8 660 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 AFAP1L1Q8TED9 768 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 DCPSQ96C86 337 aaKnown RBP17.68■□□□□ 0.42
TMC6-224ENST00000593044 NLRC4Q9NPP4 1024 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 TCEAL9Q9UHQ7 104 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 DMGDHQ9UI17 866 aaKnown RBP17.68■□□□□ 0.42
TMC6-224ENST00000593044 GHRHRQ02643 423 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 KCNMA1Q12791 1236 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 MAP9Q49MG5 647 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 ODR4Q5SWX8 454 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 RRAGAQ7L523 313 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 SULF1Q8IWU6 871 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 SBF1O95248 1867 aa17.68■□□□□ 0.42
TMC6-224ENST00000593044 AGPSO00116 658 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 P4HBP07237 508 aaKnown RBP17.67■□□□□ 0.42
TMC6-224ENST00000593044 FDX1P10109 184 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 EIF4A3P38919 411 aaKnown RBP17.67■□□□□ 0.42
TMC6-224ENST00000593044 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 CCDC170Q8IYT3 715 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 LRRC1Q9BTT6 524 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 MAP3K20Q9NYL2 800 aaKnown RBP17.67■□□□□ 0.42
TMC6-224ENST00000593044 PPP2R3BQ9Y5P8 575 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 RBBP6Q7Z6E9 1792 aaKnown RBP17.67■□□□□ 0.42
TMC6-224ENST00000593044 NR3C2P08235 984 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 AARSP49588 968 aaKnown RBP eCLIP17.67■□□□□ 0.427e-7■■■□□ 19.1
TMC6-224ENST00000593044 DNA2P51530 1060 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 KIF11P52732 1056 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 SP4Q02446 784 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 EDRF1Q3B7T1 1238 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 CCNI2Q6ZMN8 369 aaPredicted RBP17.67■□□□□ 0.42
TMC6-224ENST00000593044 CACNA2D4Q7Z3S7 1137 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 TRIM59Q8IWR1 403 aa17.67■□□□□ 0.42
TMC6-224ENST00000593044 FAM178BQ8IXR5 827 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms