RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.29
H3F3B-212ENST00000592643 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 KDM3AQ9Y4C1 1321 aa13.27□□□□□ -0.29
H3F3B-212ENST00000592643 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.26□□□□□ -0.29
H3F3B-212ENST00000592643 LAD1O00515 517 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 MAGEB2O15479 319 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 PARNO95453 639 aaKnown RBP13.26□□□□□ -0.29
H3F3B-212ENST00000592643 RARRES1P49788 294 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
H3F3B-212ENST00000592643 KIZQ2M2Z5 673 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 CNKSR3Q6P9H4 555 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 KSR1Q8IVT5 923 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 NME8Q8N427 588 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 METTL13Q8N6R0 699 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 TNPO1Q92973 898 aaKnown RBP13.26□□□□□ -0.29
H3F3B-212ENST00000592643 CHAMP1Q96JM3 812 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 SUGCTQ9HAC7 445 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 TUFT1Q9NNX1 390 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
H3F3B-212ENST00000592643 TRPV2Q9Y5S1 764 aa13.26□□□□□ -0.29
H3F3B-212ENST00000592643 ARHGEF15O94989 841 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 MYOGP15173 224 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 CD52P31358 61 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 GPC3P51654 580 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 RABGGTBP53611 331 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 TBC1D8BQ0IIM8 1120 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 TMEM266Q2M3C6 531 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 FOXD4L5Q5VV16 416 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-212ENST00000592643 CRIPAKQ8N1N5 446 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 NEK9Q8TD19 979 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 FOXD4L4Q8WXT5 416 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-212ENST00000592643 CEP170P1Q96L14 293 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 PNMA5Q96PV4 448 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 OSMRQ99650 979 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 ANKEF1Q9NU02 776 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 LRWD1Q9UFC0 647 aa13.25□□□□□ -0.29
H3F3B-212ENST00000592643 YBX2Q9Y2T7 364 aaKnown RBP13.25□□□□□ -0.29
H3F3B-212ENST00000592643 NOC2LQ9Y3T9 749 aaKnown RBP13.25□□□□□ -0.29
H3F3B-212ENST00000592643 MYH9P35579 1960 aaKnown RBP13.24□□□□□ -0.29
H3F3B-212ENST00000592643 VWA3AA6NCI4 1184 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 MGEA5O60502 916 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
H3F3B-212ENST00000592643 ZSCAN22P10073 491 aaPredicted RBP13.24□□□□□ -0.29
H3F3B-212ENST00000592643 DDIT3P35638 169 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 NLRP11P59045 1033 aaKnown RBP13.24□□□□□ -0.29
H3F3B-212ENST00000592643 SMAD3P84022 425 aaKnown RBP13.24□□□□□ -0.29
H3F3B-212ENST00000592643 XKR9Q5GH70 373 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 IER5Q5VY09 327 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 ARL6IP4Q66PJ3 421 aaKnown RBP13.24□□□□□ -0.29
H3F3B-212ENST00000592643 DTHD1Q6ZMT9 781 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 TSHZ1Q6ZSZ6 1077 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 USP49Q70CQ1 688 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 RSPH3Q86UC2 560 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 FAM228AQ86W67 206 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 PBX4Q9BYU1 374 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 IFIH1Q9BYX4 1025 aaKnown RBP13.24□□□□□ -0.29
H3F3B-212ENST00000592643 ERVK-5Q9HDB9 667 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 FBXO2Q9UK22 296 aaPredicted RBP13.24□□□□□ -0.29
H3F3B-212ENST00000592643 PADI3Q9ULW8 664 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 EYSQ5T1H1 3165 aa13.24□□□□□ -0.29
H3F3B-212ENST00000592643 ABHD14A-ACY1A0A1B0GW23 586 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 BAIAP3O94812 1187 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.292e-12■□□□□ 10.2
H3F3B-212ENST00000592643 NASPP49321 788 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-212ENST00000592643 CRYBB1P53674 252 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-212ENST00000592643 GRB10Q13322 594 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 EMC2Q15006 297 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 HYIQ5T013 277 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 Q7L0L9 218 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 SPRED2Q7Z698 418 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 ASAP3Q8TDY4 903 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 TTYH1Q9H313 450 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-212ENST00000592643 IFT122Q9HBG6 1241 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 GPRC5CQ9NQ84 441 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 SUCLA2Q9P2R7 463 aaPredicted RBP13.23□□□□□ -0.29
H3F3B-212ENST00000592643 DBR1Q9UK59 544 aaKnown RBP13.23□□□□□ -0.29
H3F3B-212ENST00000592643 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 AKT3Q9Y243 479 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 GINS2Q9Y248 185 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 SLC4A7Q9Y6M7 1214 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 SQORQ9Y6N5 450 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 PTPRSQ13332 1948 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 TRANK1O15050 2925 aa13.23□□□□□ -0.29
H3F3B-212ENST00000592643 COL6A3P12111 3177 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 KAT6AQ92794 2004 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 COL4A6Q14031 1691 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 A0A087WZ62 844 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.22□□□□□ -0.29
H3F3B-212ENST00000592643 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.22□□□□□ -0.29
H3F3B-212ENST00000592643 ZBBXA8MT70 800 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 E9PMD0 336 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 ENPP3O14638 875 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 DKC1O60832 514 aaKnown RBP eCLIP13.22□□□□□ -0.29
H3F3B-212ENST00000592643 BRD1O95696 1058 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 F13A1P00488 732 aa13.22□□□□□ -0.29
H3F3B-212ENST00000592643 RPLP2P05387 115 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms