RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 SMC3Q9UQE7 1217 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 AKT3Q9Y243 479 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 INSL6Q9Y581 213 aa18.39■□□□□ 0.53
CIRBP-233ENST00000591622 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.39■□□□□ 0.53
CIRBP-233ENST00000591622 SIP14410 1827 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 IGKV6-21A0A0C4DH24 114 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 MAFO75444 373 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-233ENST00000591622 RPS6KA5O75582 802 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 SLITRK3O94933 977 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 UPP2O95045 317 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 NLRP11P59045 1033 aaKnown RBP18.38■□□□□ 0.53
CIRBP-233ENST00000591622 HTRA4P83105 476 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-233ENST00000591622 CYP4A11Q02928 519 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 TMEM266Q2M3C6 531 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 TTC38Q5R3I4 469 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 PLA2G4FQ68DD2 849 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 FAM43BQ6ZT52 329 aaPredicted RBP18.38■□□□□ 0.53
CIRBP-233ENST00000591622 OSMRQ99650 979 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 HSD17B14Q9BPX1 270 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 EIF2AK1Q9BQI3 630 aaKnown RBP18.38■□□□□ 0.53
CIRBP-233ENST00000591622 CYP26B1Q9NR63 512 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 NOC2LQ9Y3T9 749 aaKnown RBP18.38■□□□□ 0.53
CIRBP-233ENST00000591622 COL6A3P12111 3177 aa18.38■□□□□ 0.53
CIRBP-233ENST00000591622 YWHABP31946 246 aaKnown RBP18.37■□□□□ 0.53
CIRBP-233ENST00000591622 DNM2P50570 870 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 NPEPPSP55786 919 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 NFX1Q12986 1120 aaKnown RBP18.37■□□□□ 0.53
CIRBP-233ENST00000591622 CTTNQ14247 550 aaKnown RBP18.37■□□□□ 0.53
CIRBP-233ENST00000591622 ODR4Q5SWX8 454 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 OTUD6AQ7L8S5 288 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 RTN4RL1Q86UN2 441 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-233ENST00000591622 TPH2Q8IWU9 490 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 NEK9Q8TD19 979 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 GAS2L1Q99501 681 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-233ENST00000591622 ADAMTS10Q9H324 1103 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 ERVK-5Q9HDB9 667 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 PPME1Q9Y570 386 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 GBF1Q92538 1859 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
CIRBP-233ENST00000591622 H3BQV1 296 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 GPR182O15218 404 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 OR52Z1P0C646 297 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 TOB1P50616 345 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-233ENST00000591622 CDC42EP1Q00587 391 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 DRP2Q13474 957 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 CUL4AQ13619 759 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 MCTP1Q6DN14 999 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 ZNF579Q8NAF0 562 aaKnown RBP18.36■□□□□ 0.53
CIRBP-233ENST00000591622 LINC01599Q8WXQ3 324 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 CEP170P1Q96L14 293 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 JPH2Q9BR39 696 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-233ENST00000591622 TSPYL2Q9H2G4 693 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-233ENST00000591622 TMX1Q9H3N1 280 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 CERS4Q9HA82 394 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 ST3GAL5Q9UNP4 418 aa18.36■□□□□ 0.53
CIRBP-233ENST00000591622 MYH9P35579 1960 aaKnown RBP18.35■□□□□ 0.53
CIRBP-233ENST00000591622 LINC01553A4QN01 128 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 POTEMA6NI47 508 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 ZBTB39O15060 712 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 LYPLA2O95372 231 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 EIF4BP23588 611 aaKnown RBP18.35■□□□□ 0.53
CIRBP-233ENST00000591622 GPC3P51654 580 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 NBR1Q14596 966 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 EXOC8Q8IYI6 725 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 C4orf32Q8N8J7 132 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 SP7Q8TDD2 431 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-233ENST00000591622 SLC7A3Q8WY07 619 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 YME1L1Q96TA2 773 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 CHD7Q9P2D1 2997 aa18.35■□□□□ 0.53
CIRBP-233ENST00000591622 RFC5P40937 340 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 TECP42680 631 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 POLGP54098 1239 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-233ENST00000591622 ADGRE1Q14246 886 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 XKR9Q5GH70 373 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 LARP1BQ659C4 914 aaKnown RBP18.34■□□□□ 0.53
CIRBP-233ENST00000591622 SPRED2Q7Z698 418 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 FAM228AQ86W67 206 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 CRIPAKQ8N1N5 446 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 MAFAQ8NHW3 353 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-233ENST00000591622 ARNTL2Q8WYA1 636 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 ZNF668Q96K58 619 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-233ENST00000591622 DHX33Q9H6R0 707 aaKnown RBP18.34■□□□□ 0.53
CIRBP-233ENST00000591622 SUCLA2Q9P2R7 463 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-233ENST00000591622 PCDHB6Q9Y5E3 794 aa18.34■□□□□ 0.53
CIRBP-233ENST00000591622 MICAL3Q7RTP6 2002 aa18.33■□□□□ 0.53
CIRBP-233ENST00000591622 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.52
CIRBP-233ENST00000591622 ERVK-21P61565 698 aa18.33■□□□□ 0.52
CIRBP-233ENST00000591622 NLRP7Q8WX94 980 aa18.33■□□□□ 0.52
CIRBP-233ENST00000591622 SCLT1Q96NL6 688 aa18.33■□□□□ 0.52
CIRBP-233ENST00000591622 TGS1Q96RS0 853 aaKnown RBP18.33■□□□□ 0.52
CIRBP-233ENST00000591622 ANKEF1Q9NU02 776 aa18.33■□□□□ 0.52
CIRBP-233ENST00000591622 WDR81Q562E7 1941 aa18.32■□□□□ 0.52
CIRBP-233ENST00000591622 DENND3A2RUS2 1198 aa18.32■□□□□ 0.52
CIRBP-233ENST00000591622 EPOPA6NHQ4 379 aa18.32■□□□□ 0.52
CIRBP-233ENST00000591622 RFXAPO00287 272 aa18.32■□□□□ 0.52
CIRBP-233ENST00000591622 MGEA5O60502 916 aa18.32■□□□□ 0.52
CIRBP-233ENST00000591622 SPATA31C1P0DKV0 1188 aa18.32■□□□□ 0.52
CIRBP-233ENST00000591622 IGFBP4P22692 258 aa18.32■□□□□ 0.52
CIRBP-233ENST00000591622 FXR2P51116 673 aaKnown RBP eCLIP18.32■□□□□ 0.52
CIRBP-233ENST00000591622 PTGDRQ13258 359 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms