RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 CYP26B1Q9NR63 512 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 CEP131Q9UPN4 1083 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 MTMR6Q9Y217 621 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
VMP1-211ENST00000591315 COL6A3P12111 3177 aa12.91□□□□□ -0.34
VMP1-211ENST00000591315 ARID2Q68CP9 1835 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 IGKV6-21A0A0C4DH24 114 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 GPR32O75388 356 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
VMP1-211ENST00000591315 PARNO95453 639 aaKnown RBP12.9□□□□□ -0.34
VMP1-211ENST00000591315 DNAJB2P25686 324 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 YWHABP31946 246 aaKnown RBP12.9□□□□□ -0.34
VMP1-211ENST00000591315 NLRP11P59045 1033 aaKnown RBP12.9□□□□□ -0.34
VMP1-211ENST00000591315 TBC1D8BQ0IIM8 1120 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 RESTQ13127 1097 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 IKBKEQ14164 716 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 FOXD4L5Q5VV16 416 aaPredicted RBP12.9□□□□□ -0.34
VMP1-211ENST00000591315 IER5Q5VY09 327 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 SPRED2Q7Z698 418 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 RTN4RL1Q86UN2 441 aaPredicted RBP12.9□□□□□ -0.34
VMP1-211ENST00000591315 CATSPER3Q86XQ3 398 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 KSR1Q8IVT5 923 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 C4orf19Q8IY42 314 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 FOXD4L4Q8WXT5 416 aaPredicted RBP12.9□□□□□ -0.34
VMP1-211ENST00000591315 SEPT8Q92599 483 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 CEP170P1Q96L14 293 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 OSMRQ99650 979 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 IFIH1Q9BYX4 1025 aaKnown RBP12.9□□□□□ -0.34
VMP1-211ENST00000591315 NKX2-4Q9H2Z4 354 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 ADAMTS10Q9H324 1103 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 TMX1Q9H3N1 280 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 ZSWIM4Q9H7M6 989 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 AKT3Q9Y243 479 aa12.9□□□□□ -0.34
VMP1-211ENST00000591315 ABHD14A-ACY1A0A1B0GW23 586 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 LCHNA4D1U4 455 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 MAGEB2O15479 319 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 MAFO75444 373 aaPredicted RBP12.89□□□□□ -0.35
VMP1-211ENST00000591315 BAIAP3O94812 1187 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 FGFR4P22455 802 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
VMP1-211ENST00000591315 ORC2Q13416 577 aaPredicted RBP12.89□□□□□ -0.35
VMP1-211ENST00000591315 RILPL1Q5EBL4 403 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 XKR9Q5GH70 373 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 HERC6Q8IVU3 1022 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 NME8Q8N427 588 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 DEFB123Q8N688 67 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 TMEM143Q96AN5 459 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
VMP1-211ENST00000591315 PADI3Q9ULW8 664 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 PRUNE2Q8WUY3 3088 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 TRANK1O15050 2925 aa12.89□□□□□ -0.35
VMP1-211ENST00000591315 KDM3AQ9Y4C1 1321 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 EYSQ5T1H1 3165 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 TTC3P53804 2025 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 MGEA5O60502 916 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 UPP2O95045 317 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 LYPLA2O95372 231 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 PDCP20941 246 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 IBSPP21815 317 aaPredicted RBP12.88□□□□□ -0.35
VMP1-211ENST00000591315 KCNJ6P48051 423 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 GPC3P51654 580 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
VMP1-211ENST00000591315 GRIN1Q05586 938 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 PKP1Q13835 747 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 FAM228AQ86W67 206 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 MYOCDQ8IZQ8 938 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 TIFAQ96CG3 184 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 MMTAG2Q9BU76 263 aaKnown RBP12.88□□□□□ -0.35
VMP1-211ENST00000591315 SEMA6BQ9H3T3 888 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
VMP1-211ENST00000591315 POLD4Q9HCU8 107 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 ERVK-5Q9HDB9 667 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
VMP1-211ENST00000591315 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
VMP1-211ENST00000591315 M0QZ92 97 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 ENPP3O14638 875 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 STX6O43752 255 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 CCT6AP40227 531 aaKnown RBP12.87□□□□□ -0.35
VMP1-211ENST00000591315 CRYBB1P53674 252 aaPredicted RBP12.87□□□□□ -0.35
VMP1-211ENST00000591315 NFX1Q12986 1120 aaKnown RBP12.87□□□□□ -0.35
VMP1-211ENST00000591315 EMC2Q15006 297 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 SF3A1Q15459 793 aaKnown RBP12.87□□□□□ -0.35
VMP1-211ENST00000591315 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 GUCD1Q96NT3 240 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 SLC9A7Q96T83 725 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 POLR3CQ9BUI4 534 aaPredicted RBP12.87□□□□□ -0.35
VMP1-211ENST00000591315 CERS4Q9HA82 394 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 TUFT1Q9NNX1 390 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 MTMR10Q9NXD2 777 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 ST3GAL5Q9UNP4 418 aa12.87□□□□□ -0.35
VMP1-211ENST00000591315 REV3LO60673 3130 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 A0A087WZ62 844 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 VWA3AA6NCI4 1184 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 DKC1O60832 514 aaKnown RBP eCLIP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms