RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CHMP2AO43633 222 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 ZNF862O60290 1169 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
MBD1-220ENST00000589758 GPR32O75388 356 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 PSMD10O75832 226 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 VTNP04004 478 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 ANAPC15P60006 121 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 PRKCEQ02156 737 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 NONOQ15233 471 aaKnown RBP eCLIP16.19■□□□□ 0.18
MBD1-220ENST00000589758 PAN2Q504Q3 1202 aaKnown RBP16.19■□□□□ 0.18
MBD1-220ENST00000589758 PTCRAQ6ISU1 281 aaPredicted RBP16.19■□□□□ 0.18
MBD1-220ENST00000589758 MIER3Q7Z3K6 550 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 KRT25Q7Z3Z0 450 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 MBOAT7Q96N66 472 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 OSMRQ99650 979 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 UNC45AQ9H3U1 944 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 PLAGL2Q9UPG8 496 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 AKT3Q9Y243 479 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 FAM50BQ9Y247 325 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 WDR81Q562E7 1941 aa16.19■□□□□ 0.18
MBD1-220ENST00000589758 GRXCR2A6NFK2 248 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 C9IYK1 514 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 MGEA5O60502 916 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 CLCN3P51790 818 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 NLRP11P59045 1033 aaKnown RBP16.18■□□□□ 0.18
MBD1-220ENST00000589758 ANKRD1Q15327 319 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 FAM228AQ86W67 206 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 LINC01465Q8N7H1 131 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 PPP2R3CQ969Q6 453 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 PPP1R16BQ96T49 567 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 ELAC1Q9H777 363 aaKnown RBP16.18■□□□□ 0.18
MBD1-220ENST00000589758 REV3LO60673 3130 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 STK36Q9NRP7 1315 aa16.18■□□□□ 0.18
MBD1-220ENST00000589758 XIRP2A4UGR9 3374 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 TDP2O95551 362 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 FAM189BP81408 668 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 CDC42EP1Q00587 391 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 TBC1D8BQ0IIM8 1120 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 SCRN1Q12765 414 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 NPY5RQ15761 445 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 EP400NLQ6ZTU2 488 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 FAM178BQ8IXR5 827 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 LRRC71Q8N4P6 559 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 AIFM3Q96NN9 605 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 PHF20Q9BVI0 1012 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 ATP6V0A4Q9HBG4 840 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 ALG13Q9NP73 1137 aaKnown RBP16.17■□□□□ 0.18
MBD1-220ENST00000589758 AAASQ9NRG9 546 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 TMEM161AQ9NX61 479 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 CLDND1Q9NY35 253 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 DDX25Q9UHL0 483 aaKnown RBP16.17■□□□□ 0.18
MBD1-220ENST00000589758 PCDHB12Q9Y5F1 795 aa16.17■□□□□ 0.18
MBD1-220ENST00000589758 MUC3AQ02505 3323 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 CCDC194A0A1B0GVG4 234 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 H3BQ06 376 aaPredicted RBP16.16■□□□□ 0.18
MBD1-220ENST00000589758 PFKFB2O60825 505 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 ITGB1P05556 798 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 IL9P15248 144 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
MBD1-220ENST00000589758 IBSPP21815 317 aaPredicted RBP16.16■□□□□ 0.18
MBD1-220ENST00000589758 EIF4BP23588 611 aaKnown RBP16.16■□□□□ 0.18
MBD1-220ENST00000589758 GATMP50440 423 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 DSC3Q14574 896 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 UGCGQ16739 394 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 INF2Q27J81 1249 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 CTC1Q2NKJ3 1217 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 XKR3Q5GH77 459 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 SPOUT1Q5T280 376 aaKnown RBP16.16■□□□□ 0.18
MBD1-220ENST00000589758 B3GNT9Q6UX72 402 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 KLHL23Q8NBE8 558 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 ETNPPLQ8TBG4 499 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 SPPL3Q8TCT6 385 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 WASF1Q92558 559 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 GJA10Q969M2 543 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 NAP1L4Q99733 375 aaKnown RBP16.16■□□□□ 0.18
MBD1-220ENST00000589758 NIFKQ9BYG3 293 aaKnown RBP16.16■□□□□ 0.18
MBD1-220ENST00000589758 ADAMTS10Q9H324 1103 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 KCNJ14Q9UNX9 436 aa16.16■□□□□ 0.18
MBD1-220ENST00000589758 KIAA1671Q9BY89 1806 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 NCOR1O75376 2440 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 TBKBP1A7MCY6 615 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 HOXA2O43364 376 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 DKC1O60832 514 aaKnown RBP eCLIP16.15■□□□□ 0.18
MBD1-220ENST00000589758 GCFC2P16383 781 aaKnown RBP16.15■□□□□ 0.18
MBD1-220ENST00000589758 COL9A1P20849 921 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 DNM2P50570 870 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 GPC3P51654 580 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 UBE3AQ05086 875 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 HYAL1Q12794 435 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 TARBP2Q15633 366 aaKnown RBP16.15■□□□□ 0.18
MBD1-220ENST00000589758 CSPP1Q1MSJ5 1256 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 LETM2Q2VYF4 491 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 FAM102BQ5T8I3 360 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 PPP4R3AQ6IN85 833 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 FAM20AQ96MK3 541 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 SEPT9Q9UHD8 586 aaPredicted RBP16.15■□□□□ 0.18
MBD1-220ENST00000589758 TPCN1Q9ULQ1 816 aa16.15■□□□□ 0.18
MBD1-220ENST00000589758 BRWD1Q9NSI6 2320 aa16.14■□□□□ 0.18
MBD1-220ENST00000589758 FNDC1Q4ZHG4 1894 aaPredicted RBP16.14■□□□□ 0.17
MBD1-220ENST00000589758 ATG2AQ2TAZ0 1938 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms