RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 EGFRP00533 1210 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 GOLGA6DP0CG33 693 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 RFX1P22670 979 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 RBM5P52756 815 aaKnown RBP eCLIP15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 MYBPC2Q14324 1141 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 KIAA0753Q2KHM9 967 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 CATSPER3Q86XQ3 398 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 C1orf131Q8NDD1 294 aaKnown RBP15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 NEK9Q8TD19 979 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 CHURC1Q8WUH1 139 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 WDR11Q9BZH6 1224 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 GOPCQ9HD26 462 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 GOLGA6AQ9NYA3 693 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 ATRNL1Q5VV63 1379 aa15.35■□□□□ 0.05
NEDD4L-223ENST00000588516 MYH10P35580 1976 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 CCDC188H7C350 402 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 GPR25O00155 361 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 FAM13AO94988 1023 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 SYF2O95926 243 aaKnown RBP15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 PSMC2P35998 433 aaKnown RBP15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 SPIRE1Q08AE8 756 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 ALCAMQ13740 583 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 ARSHQ5FYA8 562 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 NFRKBQ6P4R8 1299 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 SND1Q7KZF4 910 aaKnown RBP eCLIP15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 MREGQ8N565 214 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 CDCA5Q96FF9 252 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 DRC1Q96MC2 740 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 LRRC1Q9BTT6 524 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 SUGCTQ9HAC7 445 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 KCNQ5Q9NR82 932 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 TBC1D7Q9P0N9 293 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 TFR2Q9UP52 801 aa15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
NEDD4L-223ENST00000588516 TULP2O00295 520 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 DLL1O00548 723 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 PLA2G6O60733 806 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 PPFIA4O75335 1185 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 PALMO75781 387 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 PRPF6O94906 941 aaKnown RBP15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 NR3C1P04150 777 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 STAT1P42224 750 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 SETQ01105 290 aaPredicted RBP15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 CUL1Q13616 776 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 HS2ST1Q7LGA3 356 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 NACC1Q96RE7 527 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 REEP2Q9BRK0 252 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 GDF3Q9NR23 364 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 ODF2LQ9ULJ1 636 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 PCDHB13Q9Y5F0 798 aa15.33■□□□□ 0.04
NEDD4L-223ENST00000588516 POTEFA5A3E0 1075 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 TLR2O60603 784 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 N4BP1O75113 896 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 NDUFB10O96000 172 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 TFRCP02786 760 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 H2AFZP0C0S5 128 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 SPATA31C1P0DKV0 1188 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 UCHL3P15374 230 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 GGCXP38435 758 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 CETN1Q12798 172 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 NFIAQ12857 509 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 PABPC4Q13310 644 aaKnown RBP eCLIP15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 PPP2R5AQ15172 486 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 DACT2Q5SW24 774 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 POTEGQ6S5H5 508 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 H2AFVQ71UI9 128 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 FAM160B2Q86V87 743 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 SFR1Q86XK3 245 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 CLEC10AQ8IUN9 316 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 ACTRT1Q8TDG2 376 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 NAP1L3Q99457 506 aaPredicted RBP15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 SH3GL2Q99962 352 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 EIF2AK1Q9BQI3 630 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 DBNDD1Q9H9R9 158 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 PNMA2Q9UL42 364 aa15.32■□□□□ 0.04
NEDD4L-223ENST00000588516 GCOM1H8Y6P7 765 aaPredicted RBP15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 MSH4O15457 936 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 BUB1O43683 1085 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 SHOX2O60902 331 aaPredicted RBP15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 FKTNO75072 461 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 GCNT3O95395 438 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 POLR2MP0CAP2 368 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 MATR3P43243 847 aaKnown RBP eCLIP15.31■□□□□ 0.048e-7■■■■■ 28.5
NEDD4L-223ENST00000588516 SNRPFP62306 86 aaKnown RBP15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 PPP2R5CQ13362 524 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 EPHA7Q15375 998 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 CFAP58Q5T655 872 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 IRF2BP2Q7Z5L9 587 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 SPATS2Q86XZ4 545 aaKnown RBP15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 CD302Q8IX05 232 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 SAMD3Q8N6K7 520 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 CCDC26Q8TAB7 109 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 LRRC45Q96CN5 670 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 PARVGQ9HBI0 331 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 FAM198AQ9UFP1 575 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 ADAMTS1Q9UHI8 967 aa15.31■□□□□ 0.04
NEDD4L-223ENST00000588516 VAV3Q9UKW4 847 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms