RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 TMX3Q96JJ7 454 aa23.16■■□□□ 1.3
CIRBP-209ENST00000586555 PCDHA12Q9UN75 941 aa23.16■■□□□ 1.3
CIRBP-209ENST00000586555 GTF3C3Q9Y5Q9 886 aa23.16■■□□□ 1.3
CIRBP-209ENST00000586555 KDM3AQ9Y4C1 1321 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-209ENST00000586555 NEMFO60524 1076 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 P4HBP07237 508 aaKnown RBP23.15■■□□□ 1.3
CIRBP-209ENST00000586555 TMEM62Q0P6H9 643 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 UGCGQ16739 394 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 KIAA0319LQ8IZA0 1049 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 MYOCDQ8IZQ8 938 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 GDPD5Q8WTR4 605 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 MAP7D2Q96T17 732 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 UHRF1Q96T88 793 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-209ENST00000586555 BACH2Q9BYV9 841 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 SEPT9Q9UHD8 586 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-209ENST00000586555 VAV3Q9UKW4 847 aa23.15■■□□□ 1.3
CIRBP-209ENST00000586555 DDX11L8A8MPP1 907 aa23.14■■□□□ 1.29
CIRBP-209ENST00000586555 QARSP47897 775 aaKnown RBP23.14■■□□□ 1.29
CIRBP-209ENST00000586555 TBC1D8BQ0IIM8 1120 aa23.14■■□□□ 1.29
CIRBP-209ENST00000586555 EPHA7Q15375 998 aa23.14■■□□□ 1.29
CIRBP-209ENST00000586555 SKIV2LQ15477 1246 aaKnown RBP23.14■■□□□ 1.29
CIRBP-209ENST00000586555 EFCAB12Q6NXP0 572 aa23.14■■□□□ 1.29
CIRBP-209ENST00000586555 BANK1Q8NDB2 785 aa23.14■■□□□ 1.29
CIRBP-209ENST00000586555 FTHL17Q9BXU8 183 aa23.14■■□□□ 1.29
CIRBP-209ENST00000586555 NIFKQ9BYG3 293 aaKnown RBP23.14■■□□□ 1.29
CIRBP-209ENST00000586555 NOL7Q9UMY1 257 aaKnown RBP23.14■■□□□ 1.29
CIRBP-209ENST00000586555 ATP2B1P20020 1258 aa23.13■■□□□ 1.29
CIRBP-209ENST00000586555 KCNQ1P51787 676 aa23.13■■□□□ 1.29
CIRBP-209ENST00000586555 ORC2Q13416 577 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-209ENST00000586555 NCAPH2Q6IBW4 605 aa23.13■■□□□ 1.29
CIRBP-209ENST00000586555 GINS2Q9Y248 185 aa23.13■■□□□ 1.29
CIRBP-209ENST00000586555 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-209ENST00000586555 WDR81Q562E7 1941 aa23.13■■□□□ 1.29
CIRBP-209ENST00000586555 MYO7AQ13402 2215 aa23.13■■□□□ 1.29
CIRBP-209ENST00000586555 EML1O00423 815 aa23.12■■□□□ 1.29
CIRBP-209ENST00000586555 DNM2P50570 870 aa23.12■■□□□ 1.29
CIRBP-209ENST00000586555 PAK2Q13177 524 aa23.12■■□□□ 1.29
CIRBP-209ENST00000586555 NOSTRINQ8IVI9 506 aa23.12■■□□□ 1.29
CIRBP-209ENST00000586555 EXOC8Q8IYI6 725 aa23.12■■□□□ 1.29
CIRBP-209ENST00000586555 JPH2Q9BR39 696 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-209ENST00000586555 TTC12Q9H892 705 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-209ENST00000586555 MTUS1Q9ULD2 1270 aa23.12■■□□□ 1.29
CIRBP-209ENST00000586555 AKT3Q9Y243 479 aa23.12■■□□□ 1.29
CIRBP-209ENST00000586555 TTC3P53804 2025 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 CD52P31358 61 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 MCM7P33993 719 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 TXKP42681 527 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 TRAPPC10P48553 1259 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 CRYBB1P53674 252 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-209ENST00000586555 CDC42EP1Q00587 391 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 MTERF2Q49AM1 385 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 OTUD6AQ7L8S5 288 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 HLA-CQ95604 372 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 C17orf80Q9BSJ5 609 aa23.11■■□□□ 1.29
CIRBP-209ENST00000586555 COL4A6Q14031 1691 aa23.1■■□□□ 1.29
CIRBP-209ENST00000586555 GPR182O15218 404 aa23.1■■□□□ 1.29
CIRBP-209ENST00000586555 RPS6KA5O75582 802 aa23.1■■□□□ 1.29
CIRBP-209ENST00000586555 TARBP2Q15633 366 aaKnown RBP23.1■■□□□ 1.29
CIRBP-209ENST00000586555 ZSWIM4Q9H7M6 989 aa23.1■■□□□ 1.29
CIRBP-209ENST00000586555 AGO3Q9H9G7 860 aaKnown RBP23.1■■□□□ 1.29
CIRBP-209ENST00000586555 PADI3Q9ULW8 664 aa23.1■■□□□ 1.29
CIRBP-209ENST00000586555 SMC3Q9UQE7 1217 aa23.1■■□□□ 1.29
CIRBP-209ENST00000586555 PPME1Q9Y570 386 aa23.1■■□□□ 1.29
CIRBP-209ENST00000586555 ENPP3O14638 875 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 UPP2O95045 317 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 CD2BP2O95400 341 aaKnown RBP23.09■■□□□ 1.29
CIRBP-209ENST00000586555 VTNP04004 478 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 U2AF2P26368 475 aaKnown RBP eCLIP23.09■■□□□ 1.292e-10■□□□□ 10.9
CIRBP-209ENST00000586555 CLCN3P51790 818 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 NFX1Q12986 1120 aaKnown RBP23.09■■□□□ 1.29
CIRBP-209ENST00000586555 KIZQ2M2Z5 673 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 C4orf19Q8IY42 314 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 FBXO22Q8NEZ5 403 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 NEK9Q8TD19 979 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 SAMD11Q96NU1 681 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 NECAB3Q96P71 396 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-209ENST00000586555 RNF216Q9NWF9 866 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-209ENST00000586555 NLRC5Q86WI3 1866 aa23.09■■□□□ 1.29
CIRBP-209ENST00000586555 EVPLQ92817 2033 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 H3BQV1 296 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 GJB2P29033 226 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 SPIRE1Q08AE8 756 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 TTC38Q5R3I4 469 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 TPH2Q8IWU9 490 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 LRRC71Q8N4P6 559 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 SCLT1Q96NL6 688 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 MTMR9Q96QG7 549 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 YME1L1Q96TA2 773 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 LXNQ9BS40 222 aa23.08■■□□□ 1.29
CIRBP-209ENST00000586555 LOXHD1Q8IVV2 1947 aa23.08■■□□□ 1.28
CIRBP-209ENST00000586555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-209ENST00000586555 STBD1O95210 358 aa23.07■■□□□ 1.28
CIRBP-209ENST00000586555 NLRP11P59045 1033 aaKnown RBP23.07■■□□□ 1.28
CIRBP-209ENST00000586555 ZNF174Q15697 407 aa23.07■■□□□ 1.28
CIRBP-209ENST00000586555 EPC2Q52LR7 807 aa23.07■■□□□ 1.28
CIRBP-209ENST00000586555 MCTP1Q6DN14 999 aa23.07■■□□□ 1.28
CIRBP-209ENST00000586555 ANO5Q75V66 913 aa23.07■■□□□ 1.28
CIRBP-209ENST00000586555 LINC01465Q8N7H1 131 aa23.07■■□□□ 1.28
CIRBP-209ENST00000586555 SLC7A3Q8WY07 619 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms