RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 KRT40Q6A162 431 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 TMEM192Q8IY95 271 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 DIS3L2Q8IYB7 885 aaKnown RBP13.9□□□□□ -0.18
SS18-225ENST00000585121 LRRC71Q8N4P6 559 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 PPP1R16BQ96T49 567 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 OSMRQ99650 979 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 JPH2Q9BR39 696 aaPredicted RBP13.9□□□□□ -0.18
SS18-225ENST00000585121 NIFKQ9BYG3 293 aaKnown RBP13.9□□□□□ -0.18
SS18-225ENST00000585121 CDHR5Q9HBB8 845 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 ST3GAL5Q9UNP4 418 aa13.9□□□□□ -0.18
SS18-225ENST00000585121 NOC2LQ9Y3T9 749 aaKnown RBP13.9□□□□□ -0.18
SS18-225ENST00000585121 BTBD18B2RXH4 712 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 GPR32O75388 356 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.19
SS18-225ENST00000585121 IBSPP21815 317 aaPredicted RBP13.9□□□□□ -0.19
SS18-225ENST00000585121 NLRP11P59045 1033 aaKnown RBP13.9□□□□□ -0.19
SS18-225ENST00000585121 MRPS5P82675 430 aaKnown RBP13.9□□□□□ -0.19
SS18-225ENST00000585121 HMGN5P82970 282 aaKnown RBP13.9□□□□□ -0.19
SS18-225ENST00000585121 AAK1Q2M2I8 961 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 TJAP1Q5JTD0 557 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 EXOC8Q8IYI6 725 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 FAM184AQ8NB25 1140 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 BANK1Q8NDB2 785 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 C8orf76Q96K31 380 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 ERVK-5Q9HDB9 667 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 PRDM6Q9NQX0 595 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 C1orf112Q9NSG2 853 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 PCDHB7Q9Y5E2 793 aa13.9□□□□□ -0.19
SS18-225ENST00000585121 ADGRA3Q8IWK6 1321 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 TRANK1O15050 2925 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 MYH9P35579 1960 aaKnown RBP13.89□□□□□ -0.19
SS18-225ENST00000585121 LPXNO60711 386 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 RB1P06400 928 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 ZSCAN20P17040 1043 aaPredicted RBP13.89□□□□□ -0.19
SS18-225ENST00000585121 CTNNB1P35222 781 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 SARSP49591 514 aaKnown RBP13.89□□□□□ -0.19
SS18-225ENST00000585121 GPM6BQ13491 265 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 GNL2Q13823 731 aaKnown RBP13.89□□□□□ -0.19
SS18-225ENST00000585121 EPHA7Q15375 998 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 TARBP2Q15633 366 aaKnown RBP13.89□□□□□ -0.19
SS18-225ENST00000585121 EARS2Q5JPH6 523 aaKnown RBP13.89□□□□□ -0.19
SS18-225ENST00000585121 NCAPH2Q6IBW4 605 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 RTN4RL1Q86UN2 441 aaPredicted RBP13.89□□□□□ -0.19
SS18-225ENST00000585121 NLRP7Q8WX94 980 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 HAS1Q92839 578 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 TNFRSF25Q93038 417 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 ADAM2Q99965 735 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 VAV3Q9UKW4 847 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 COG5Q9UP83 839 aa13.89□□□□□ -0.19
SS18-225ENST00000585121 PRRC2BQ5JSZ5 2229 aaKnown RBP13.88□□□□□ -0.19
SS18-225ENST00000585121 PTPRSQ13332 1948 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 H3BNC9 293 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 EML1O00423 815 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 ST18O60284 1047 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 DGKIO75912 1065 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 RBM25P49756 843 aaKnown RBP13.88□□□□□ -0.19
SS18-225ENST00000585121 RABEP1Q15276 862 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 CALCRLQ16602 461 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 SLC24A5Q71RS6 500 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 OTUD6AQ7L8S5 288 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 FAM228AQ86W67 206 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 LINC01465Q8N7H1 131 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 TMEM40Q8WWA1 233 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 ZNF689Q96CS4 500 aaPredicted RBP13.88□□□□□ -0.19
SS18-225ENST00000585121 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
SS18-225ENST00000585121 TMX1Q9H3N1 280 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 RGS18Q9NS28 235 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 PCDHA12Q9UN75 941 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 PPME1Q9Y570 386 aa13.88□□□□□ -0.19
SS18-225ENST00000585121 FAM205CA6NFA0 338 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 NEMFO60524 1076 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 EIF4BP23588 611 aaKnown RBP13.87□□□□□ -0.19
SS18-225ENST00000585121 BMPR1AP36894 532 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 GPC3P51654 580 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 GUCY1B3Q02153 619 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 CMTR2Q8IYT2 770 aaKnown RBP13.87□□□□□ -0.19
SS18-225ENST00000585121 SLC7A3Q8WY07 619 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 MRPL38Q96DV4 380 aaKnown RBP13.87□□□□□ -0.19
SS18-225ENST00000585121 ASB2Q96Q27 587 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 C11orf84Q9BUA3 381 aaPredicted RBP13.87□□□□□ -0.19
SS18-225ENST00000585121 GCOM2Q9BZD3 368 aaPredicted RBP13.87□□□□□ -0.19
SS18-225ENST00000585121 ADAMTS10Q9H324 1103 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 ZSWIM4Q9H7M6 989 aa13.87□□□□□ -0.19
SS18-225ENST00000585121 MAFO75444 373 aaPredicted RBP13.86□□□□□ -0.19
SS18-225ENST00000585121 ST3GAL1Q11201 340 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 PAN2Q504Q3 1202 aaKnown RBP13.86□□□□□ -0.19
SS18-225ENST00000585121 TIGD5Q53EQ6 642 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 ANO5Q75V66 913 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 C4orf19Q8IY42 314 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 CLP1Q92989 425 aaKnown RBP13.86□□□□□ -0.19
SS18-225ENST00000585121 HLA-CQ95604 372 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 KIF2CQ99661 725 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 LXNQ9BS40 222 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 PLVAPQ9BX97 442 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 INO80BQ9C086 356 aaPredicted RBP13.86□□□□□ -0.19
SS18-225ENST00000585121 RC3H2Q9HBD1 1191 aaKnown RBP13.86□□□□□ -0.19
SS18-225ENST00000585121 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
SS18-225ENST00000585121 CYP26B1Q9NR63 512 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms