RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 SPATA4Q8NEY3 305 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 CCDC114Q96M63 670 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 RPS6KC1Q96S38 1066 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 MAK16Q9BXY0 300 aaKnown RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 CARD9Q9H257 536 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 ASIC3Q9UHC3 531 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 DNAJC12Q9UKB3 198 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 SLIT2O94813 1529 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 AFDNP55196 1824 aaKnown RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 SNHG28P0DPA3 235 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 GZMAP12544 262 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 TMOD1P28289 359 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 SLC8A1P32418 973 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 RFC5P40937 340 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 UBE2SQ16763 222 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 FAM102BQ5T8I3 360 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 TRIM65Q6PJ69 517 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 GJA10Q969M2 543 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.32□□□□□ -1.4
RTTN-209ENST00000583043 TMEM51Q9NW97 253 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 SENP1Q9P0U3 644 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 ZNRF3Q9ULT6 936 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 TRIM49BA6NDI0 452 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 MYCLP12524 364 aaPredicted RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 SH3BGRP55822 239 aaPredicted RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 STILQ15468 1287 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 SLC15A2Q16348 729 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 DCUN1D2Q6PH85 259 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 NOP56O00567 594 aaKnown RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 MOCS3O95396 460 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 NDUFB10O96000 172 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 BMT2Q1RMZ1 405 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 ZNF710Q8N1W2 664 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 TMC2Q8TDI7 906 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 CFAP57Q96MR6 1250 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 INTS2Q9H0H0 1204 aaKnown RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 TMEM60Q9H2L4 133 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 RTN2O75298 545 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 ATF2P15336 505 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 IRX3P78415 501 aaPredicted RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 C1orf131Q8NDD1 294 aaKnown RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 SMCR8Q8TEV9 937 aaPredicted RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 CAVIN3Q969G5 261 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 EPB41L5Q9HCM4 733 aa6.32□□□□□ -1.4
RTTN-209ENST00000583043 DDX56Q9NY93 547 aaKnown RBP6.32□□□□□ -1.4
RTTN-209ENST00000583043 E9PMD0 336 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 CHGBP05060 677 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 TNNI1P19237 187 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 PRKCIP41743 596 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 DR1Q01658 176 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 NBPF9Q3BBW0 867 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 ZNF746Q6NUN9 644 aaPredicted RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 RNF207Q6ZRF8 634 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 ARHGEF18Q6ZSZ5 1173 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 TRIM59Q8IWR1 403 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 SLC44A5Q8NCS7 719 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 ACTRT1Q8TDG2 376 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 KRT12Q99456 494 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 FRMD8Q9BZ67 464 aaPredicted RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 ROPN1BQ9BZX4 212 aaPredicted RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 ROPN1Q9HAT0 212 aaPredicted RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 PIM2Q9P1W9 311 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 ADAMTS1Q9UHI8 967 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 TMX2Q9Y320 296 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 HNRNPDLO14979 420 aaKnown RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 TBC1D12O60347 775 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 PLS3P13797 630 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 POLGP54098 1239 aaPredicted RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 MTMR1Q13613 665 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 USP49Q70CQ1 688 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 ADGRA1Q86SQ6 560 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 POMGNT1Q8WZA1 660 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 GRAMD1AQ96CP6 724 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 FMO2Q99518 471 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 ADPGKQ9BRR6 497 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 FAM96AQ9H5X1 160 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 ZNF219Q9P2Y4 722 aaPredicted RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 APEX2Q9UBZ4 518 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 PCDHA10Q9Y5I2 948 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 A0A0G2JLW4 131 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 SNAP23O00161 211 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 CTNND1O60716 968 aaKnown RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 ATP5HO75947 161 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 NEBLO76041 1014 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 STAMBPO95630 424 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 UCHL3P15374 230 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 SLC16A2P36021 539 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 VAMP7P51809 220 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 KLHDC7AQ5VTJ3 777 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 RSBN1LQ6PCB5 846 aaPredicted RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 C4orf22Q6V702 233 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 TRMT10CQ7L0Y3 403 aaKnown RBP6.31□□□□□ -1.4
RTTN-209ENST00000583043 ZNF507Q8TCN5 953 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 SELENOSQ9BQE4 189 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 MXRA8Q9BRK3 442 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 WDR70Q9NW82 654 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 WDR35Q9P2L0 1181 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
RTTN-209ENST00000583043 FAM205CA6NFA0 338 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms