RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 KCNT2Q6UVM3 1135 aa21.81■■□□□ 1.08
NDEL1-209ENST00000580738 FAM43BQ6ZT52 329 aaPredicted RBP21.81■■□□□ 1.08
NDEL1-209ENST00000580738 UBALD2Q8IYN6 164 aa21.81■■□□□ 1.08
NDEL1-209ENST00000580738 RUFY2Q8WXA3 655 aa21.81■■□□□ 1.08
NDEL1-209ENST00000580738 OSMRQ99650 979 aa21.81■■□□□ 1.08
NDEL1-209ENST00000580738 ELAC1Q9H777 363 aaKnown RBP21.81■■□□□ 1.08
NDEL1-209ENST00000580738 RNF19AQ9NV58 838 aa21.81■■□□□ 1.08
NDEL1-209ENST00000580738 DDX39AO00148 427 aaKnown RBP21.8■■□□□ 1.08
NDEL1-209ENST00000580738 BACH1O14867 736 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 NBL1P41271 181 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 CEP55Q53EZ4 464 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 ODR4Q5SWX8 454 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 CASC1Q6TDU7 716 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 ABHD15Q6UXT9 468 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 TMC7Q7Z402 723 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 CCDC60Q8IWA6 550 aaPredicted RBP21.8■■□□□ 1.08
NDEL1-209ENST00000580738 TMEM117Q9H0C3 514 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 HCFC2Q9Y5Z7 792 aa21.8■■□□□ 1.08
NDEL1-209ENST00000580738 CCDC69A6NI79 296 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 SH2B2O14492 632 aaPredicted RBP21.79■■□□□ 1.08
NDEL1-209ENST00000580738 VTNP04004 478 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 WEE2P0C1S8 567 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 ATP4AP20648 1035 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 CRYBB1P53674 252 aaPredicted RBP21.79■■□□□ 1.08
NDEL1-209ENST00000580738 TPRNQ4KMQ1 711 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 CASP10Q92851 521 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 MAP4K1Q92918 833 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 ZNF558Q96NG5 402 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 ADAM7Q9H2U9 754 aa21.79■■□□□ 1.08
NDEL1-209ENST00000580738 MEIS1O00470 390 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 GPR32O75388 356 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 C22orf31O95567 290 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 ASGR2P07307 311 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 KRT17Q04695 432 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 ZNF484Q5JVG2 852 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 FAM160B1Q5W0V3 765 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 CES5AQ6NT32 575 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 TYW1BQ6NUM6 668 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 PDXDC2PQ6P474 469 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 TMTC3Q6ZXV5 915 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 MRPL43Q8N983 215 aaKnown RBP21.78■■□□□ 1.08
NDEL1-209ENST00000580738 SPG21Q9NZD8 308 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 RBM8AQ9Y5S9 174 aaKnown RBP21.78■■□□□ 1.08
NDEL1-209ENST00000580738 FAM186AA6NE01 2351 aa21.78■■□□□ 1.08
NDEL1-209ENST00000580738 DCHS1Q96JQ0 3298 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 COL1A2P08123 1366 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 WDR87Q6ZQQ6 2873 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 C2orf71A6NGG8 1288 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 SGSM2O43147 1006 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 ITIH3Q06033 890 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 WWC2Q6AWC2 1192 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 ASTLQ6HA08 431 aaPredicted RBP21.77■■□□□ 1.08
NDEL1-209ENST00000580738 SWSAP1Q6NVH7 229 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 KANK3Q6NY19 840 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 FRMD5Q7Z6J6 570 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 TMTC2Q8N394 836 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 MTA3Q9BTC8 594 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 ZNF302Q9NR11 478 aa21.77■■□□□ 1.08
NDEL1-209ENST00000580738 MYO10Q9HD67 2058 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 CLASP2O75122 1294 aaKnown RBP21.76■■□□□ 1.07
NDEL1-209ENST00000580738 CALM1P0DP23 149 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 CALM2P0DP24 149 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 CALM3P0DP25 149 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 MCM5P33992 734 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 PPM1AP35813 382 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 TRMT1LQ7Z2T5 733 aaKnown RBP21.76■■□□□ 1.07
NDEL1-209ENST00000580738 LRRC43Q8N309 656 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 METTL13Q8N6R0 699 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 C12orf76Q8N812 135 aaPredicted RBP21.76■■□□□ 1.07
NDEL1-209ENST00000580738 FANCBQ8NB91 859 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 NECTIN4Q96NY8 510 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 ANO3Q9BYT9 981 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 RIC8AQ9NPQ8 531 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 LIMD1Q9UGP4 676 aa21.76■■□□□ 1.07
NDEL1-209ENST00000580738 DHX15O43143 795 aaKnown RBP21.75■■□□□ 1.07
NDEL1-209ENST00000580738 SMC1AQ14683 1233 aaKnown RBP21.75■■□□□ 1.07
NDEL1-209ENST00000580738 CLLU1OSQ5K130 101 aa21.75■■□□□ 1.07
NDEL1-209ENST00000580738 SLC39A11Q8N1S5 342 aa21.75■■□□□ 1.07
NDEL1-209ENST00000580738 RNF169Q8NCN4 708 aa21.75■■□□□ 1.07
NDEL1-209ENST00000580738 EXOC6Q8TAG9 804 aa21.75■■□□□ 1.07
NDEL1-209ENST00000580738 TMEM87BQ96K49 555 aa21.75■■□□□ 1.07
NDEL1-209ENST00000580738 GVINP1Q7Z2Y8 2422 aa21.75■■□□□ 1.07
NDEL1-209ENST00000580738 HOXA2O43364 376 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 LIFRP42702 1097 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 NAPAP54920 295 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 RARS2Q5T160 578 aaKnown RBP21.74■■□□□ 1.07
NDEL1-209ENST00000580738 MIS18BP1Q6P0N0 1132 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 ECHDC2Q86YB7 292 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 CKAP2LQ8IYA6 745 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 ABI1Q8IZP0 508 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 LRRC2Q9BYS8 371 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 SLC12A7Q9Y666 1083 aa21.74■■□□□ 1.07
NDEL1-209ENST00000580738 NT5C1B-RDH14C9J2C7 533 aa21.73■■□□□ 1.07
NDEL1-209ENST00000580738 FAM86B1E9PN63 330 aa21.73■■□□□ 1.07
NDEL1-209ENST00000580738 FOSP01100 380 aaPredicted RBP21.73■■□□□ 1.07
NDEL1-209ENST00000580738 FAM86B2P0C5J1 330 aa21.73■■□□□ 1.07
NDEL1-209ENST00000580738 CA8P35219 290 aa21.73■■□□□ 1.07
NDEL1-209ENST00000580738 SREBF1P36956 1147 aa21.73■■□□□ 1.07
NDEL1-209ENST00000580738 MTHFRP42898 656 aa21.73■■□□□ 1.07
NDEL1-209ENST00000580738 CLCN3P51790 818 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms