RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.89□□□□□ -1.79
CDH19-204ENST00000579658 PCDHGA2Q9Y5H1 932 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 SQORQ9Y6N5 450 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 TMEM232C9JQI7 657 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 K7ELQ4 463 aaPredicted RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 SLC30A4O14863 429 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 IFIT3O14879 490 aaKnown RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 LINC01565O15544 149 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 PRC1O43663 620 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 F2P00734 622 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 HOXD8P13378 290 aaPredicted RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 PAX3P23760 479 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 NRIP1P48552 1158 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 EXOSC10Q01780 885 aaKnown RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 LAMC2Q13753 1193 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 BTG3Q14201 252 aaPredicted RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 BMS1Q14692 1282 aaKnown RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 SPPL3Q8TCT6 385 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 JAKMIP1Q96N16 626 aaKnown RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 CTAGE1Q96RT6 745 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 FTHL17Q9BXU8 183 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 FAM126AQ9BYI3 521 aaPredicted RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 KRT23Q9C075 422 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 S1PR5Q9H228 398 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 RNF41Q9H4P4 317 aaPredicted RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 LY9Q9HBG7 655 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 IGSF9Q9P2J2 1179 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 WNT16Q9UBV4 365 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 DUSP12Q9UNI6 340 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 LOXHD1Q8IVV2 1947 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 SPTBN4Q9H254 2564 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CFAP99D6REC4 459 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 FSCN2O14926 492 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 PPFIA3O75145 1194 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CD2BP2O95400 341 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 GLP2RO95838 553 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 PDGFBP01127 241 aaPredicted RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 ICAM1P05362 532 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 LINC00271P0C7V0 271 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 TXNP10599 105 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 PDHBP11177 359 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 TOP1P11387 765 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 ZNF211Q13398 564 aaPredicted RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 MRPL58Q14197 206 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 TCTN1Q2MV58 587 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 TSGA10IPQ3SY00 556 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 VARS2Q5ST30 1063 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 ZNF787Q6DD87 383 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CYP26C1Q6V0L0 522 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 TMCO2Q7Z6W1 182 aaPredicted RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 GAS2L3Q86XJ1 694 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CMTR1Q8N1G2 835 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 PNMA1Q8ND90 353 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 PPTC7Q8NI37 304 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 RSPH1Q8WYR4 309 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 ACSF2Q96CM8 615 aaPredicted RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 ADAM7Q9H2U9 754 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 NGRNQ9NPE2 291 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 GMEB2Q9UKD1 530 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 PCDHB12Q9Y5F1 795 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CACNA1HO95180 2353 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 BAHCC1Q9P281 2608 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 C17orf102A2RUQ5 167 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 ESPNB1AK53 854 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 SH2B2O14492 632 aaPredicted RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 TREHO43280 583 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 TPD52L2O43399 206 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 REC8O95072 547 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 SP9P0CG40 484 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 ALAS1P13196 640 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 HOXB1P14653 301 aaPredicted RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 HOXC8P31273 242 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 SLC1A4P43007 532 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 APOBRQ0VD83 1088 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 TRDNQ13061 729 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 TDGQ13569 410 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 WTAPQ15007 396 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CCDC96Q2M329 555 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 KLHL40Q2TBA0 621 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 ODR4Q5SWX8 454 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 IFIT1BQ5T764 474 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 KIAA1841Q6NSI8 718 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 Q6ZUG5 572 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 RALYLQ86SE5 291 aaKnown RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 RSPH3Q86UC2 560 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 IQCA1Q86XH1 822 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 DGKHQ86XP1 1220 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 NME8Q8N427 588 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 SUMF1Q8NBK3 374 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 AFG1LQ8WV93 481 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 POF1BQ8WVV4 589 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 PIBF1Q8WXW3 757 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 ZNF775Q96BV0 537 aaPredicted RBP3.88□□□□□ -1.79
CDH19-204ENST00000579658 PPP1R9BQ96SB3 815 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 IWS1Q96ST2 819 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 UBAC1Q9BSL1 405 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 IER2Q9BTL4 223 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CNNM2Q9H8M5 875 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 VAT1LQ9HCJ6 419 aa3.88□□□□□ -1.79
CDH19-204ENST00000579658 CYP26B1Q9NR63 512 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms