RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 ASH2LQ9UBL3 628 aa6.63□□□□□ -1.35
PTPRM-207ENST00000578571 SMG5Q9UPR3 1016 aaKnown RBP6.63□□□□□ -1.35
PTPRM-207ENST00000578571 NUDCQ9Y266 331 aa6.63□□□□□ -1.35
PTPRM-207ENST00000578571 COQ6Q9Y2Z9 468 aa6.63□□□□□ -1.35
PTPRM-207ENST00000578571 TELO2Q9Y4R8 837 aa6.63□□□□□ -1.35
PTPRM-207ENST00000578571 SLIT3O75094 1523 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 ABCC6O95255 1503 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 TCAF2A6NFQ2 919 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 AMY2AP04746 511 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 AMY2BP19961 511 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 RAP1GAPP47736 663 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 CACNB2Q08289 660 aaPredicted RBP6.62□□□□□ -1.35
PTPRM-207ENST00000578571 ZNF460Q14592 562 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 PLEKHG4Q58EX7 1191 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 MEX3CQ5U5Q3 659 aaKnown RBP6.62□□□□□ -1.35
PTPRM-207ENST00000578571 FAM126BQ8IXS8 530 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 RBM12BQ8IXT5 1001 aaKnown RBP6.62□□□□□ -1.35
PTPRM-207ENST00000578571 SIGLEC10Q96LC7 697 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 CELF4Q9BZC1 486 aaKnown RBP6.62□□□□□ -1.35
PTPRM-207ENST00000578571 PRDM11Q9NQV5 511 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 DSEQ9UL01 958 aa6.62□□□□□ -1.35
PTPRM-207ENST00000578571 TNPO3Q9Y5L0 923 aaKnown RBP6.62□□□□□ -1.35
PTPRM-207ENST00000578571 BLMP54132 1417 aaPredicted RBP6.61□□□□□ -1.35
PTPRM-207ENST00000578571 CPDO75976 1380 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 FLT4P35916 1363 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 ZNF561-AS1K7EIQ3 104 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 PPM1GO15355 546 aaPredicted RBP6.61□□□□□ -1.35
PTPRM-207ENST00000578571 MAFKO60675 156 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 LTFP02788 710 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 C8BP07358 591 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 PDE6AP16499 860 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 PFKLP17858 780 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 HSPA1LP34931 641 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 TNNT2P45379 298 aaPredicted RBP6.61□□□□□ -1.35
PTPRM-207ENST00000578571 DNM2P50570 870 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 GPR19Q15760 415 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 PKN1Q16512 942 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 ETV3LQ6ZN32 361 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 OSTM1Q86WC4 334 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 FAM26EQ8N5C1 309 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 CLEC4DQ8WXI8 215 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 NINJ1Q92982 152 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 PNNQ9H307 717 aaKnown RBP6.61□□□□□ -1.35
PTPRM-207ENST00000578571 SMURF1Q9HCE7 757 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 CATSPERZQ9NTU4 200 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 IRAK3Q9Y616 596 aa6.61□□□□□ -1.35
PTPRM-207ENST00000578571 PHRF1Q9P1Y6 1649 aaKnown RBP6.61□□□□□ -1.35
PTPRM-207ENST00000578571 CDK12Q9NYV4 1490 aaPredicted RBP6.6□□□□□ -1.35
PTPRM-207ENST00000578571 CCER2I3L3R5 266 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 ASLP04424 464 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 IGFALSP35858 605 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 LIMS1P48059 325 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 EPHA5P54756 1037 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 JAM2P57087 298 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 LINC00310P59036 64 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 ST5P78524 1137 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 LACTBP83111 547 aaPredicted RBP6.6□□□□□ -1.35
PTPRM-207ENST00000578571 TUSC3Q13454 348 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 WDR43Q15061 677 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPRM-207ENST00000578571 KCNA10Q16322 511 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 CR1LQ2VPA4 569 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 DALRD3Q5D0E6 543 aaKnown RBP6.6□□□□□ -1.35
PTPRM-207ENST00000578571 FAM47CQ5HY64 1035 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 ARHGAP36Q6ZRI8 547 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 KCTD1Q719H9 257 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 OVCH1Q7RTY7 1134 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 B3GNT8Q7Z7M8 397 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 CISD2Q8N5K1 135 aaKnown RBP6.6□□□□□ -1.35
PTPRM-207ENST00000578571 IGSF22Q8N9C0 903 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 PANK1Q8TE04 598 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 CD244Q9BZW8 370 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 PDGFDQ9GZP0 370 aaPredicted RBP6.6□□□□□ -1.35
PTPRM-207ENST00000578571 SRPK3Q9UPE1 567 aa6.6□□□□□ -1.35
PTPRM-207ENST00000578571 FAM83GA6ND36 823 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 NPIPB6E9PJ23 425 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 MAN2B1O00754 1011 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 GSTA4O15217 222 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 PI3P19957 117 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 HSD3B2P26439 372 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 PPP2R1AP30153 589 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 STAT5AP42229 794 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 MTHFSP49914 203 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 EVA1CP58658 441 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 FOXO4P98177 505 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 CRY1Q16526 586 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 ZCCHC8Q6NZY4 707 aaKnown RBP6.59□□□□□ -1.35
PTPRM-207ENST00000578571 FAM129CQ86XR2 697 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 PTRH1Q86Y79 214 aaKnown RBP6.59□□□□□ -1.35
PTPRM-207ENST00000578571 TRIM48Q8IWZ4 208 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 TTLL11Q8NHH1 800 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 SMARCC2Q8TAQ2 1214 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 INTS7Q9NVH2 962 aaKnown RBP6.59□□□□□ -1.35
PTPRM-207ENST00000578571 DTLQ9NZJ0 730 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 MAGEC2Q9UBF1 373 aaPredicted RBP6.59□□□□□ -1.35
PTPRM-207ENST00000578571 CNOT6Q9ULM6 557 aaKnown RBP6.59□□□□□ -1.35
PTPRM-207ENST00000578571 KCTD3Q9Y597 815 aa6.59□□□□□ -1.35
PTPRM-207ENST00000578571 ABCA3Q99758 1704 aa6.59□□□□□ -1.36
PTPRM-207ENST00000578571 INSRP06213 1382 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 KIAA0232Q92628 1395 aa6.58□□□□□ -1.36
PTPRM-207ENST00000578571 MAP3K19Q56UN5 1328 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms