RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 SEPT1Q8WYJ6 367 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 TRIB2Q92519 343 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 EIF2AK1Q9BQI3 630 aaKnown RBP8.97□□□□□ -0.97
COPS3-215ENST00000578317 NT5C3AQ9H0P0 336 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 CUEDC2Q9H467 287 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 GOLPH3LQ9H4A5 285 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 DISC1Q9NRI5 854 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 CCDC39Q9UFE4 941 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 TCEAL9Q9UHQ7 104 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 FAM184BQ9ULE4 1060 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 PCDHA10Q9Y5I2 948 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 ZNF236Q9UL36 1845 aa8.97□□□□□ -0.97
COPS3-215ENST00000578317 KDM3AQ9Y4C1 1321 aa8.96□□□□□ -0.97
COPS3-215ENST00000578317 ESPNB1AK53 854 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 POLR2DO15514 142 aaKnown RBP8.96□□□□□ -0.98
COPS3-215ENST00000578317 ADCY3O60266 1144 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 PRMT3O60678 531 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 DKC1O60832 514 aaKnown RBP eCLIP8.96□□□□□ -0.98
COPS3-215ENST00000578317 PPFIA4O75335 1185 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 LYPLA2O95372 231 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 GGPS1O95749 300 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 GH1P01241 217 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 SLFN14P0C7P3 912 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 ADCYAP1R1P41586 468 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 ACTR2P61160 394 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 NKX3-2P78367 333 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 TNFAIP2Q03169 654 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 RRAGBQ5VZM2 374 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 NCAPH2Q6IBW4 605 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 MIER3Q7Z3K6 550 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 DHX37Q8IY37 1157 aaKnown RBP8.96□□□□□ -0.98
COPS3-215ENST00000578317 RAET1EQ8TD07 263 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 SNX29Q8TEQ0 813 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 CALML4Q96GE6 196 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 BCAS3Q9H6U6 928 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 MLXIPQ9HAP2 919 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 DDX19AQ9NUU7 478 aaKnown RBP8.96□□□□□ -0.98
COPS3-215ENST00000578317 DACT1Q9NYF0 836 aa8.96□□□□□ -0.98
COPS3-215ENST00000578317 A0A087X0B3 334 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 FOXN1O15353 648 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 SEPT4O43236 478 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 HMGCRP04035 888 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 PSAPP07602 524 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 HSPA1AP0DMV8 641 aaKnown RBP8.95□□□□□ -0.98
COPS3-215ENST00000578317 HSPA1BP0DMV9 641 aaKnown RBP8.95□□□□□ -0.98
COPS3-215ENST00000578317 HOXD8P13378 290 aaPredicted RBP8.95□□□□□ -0.98
COPS3-215ENST00000578317 CYBAP13498 195 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 SMPD1P17405 629 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 CCT6AP40227 531 aaKnown RBP8.95□□□□□ -0.98
COPS3-215ENST00000578317 QARSP47897 775 aaKnown RBP8.95□□□□□ -0.98
COPS3-215ENST00000578317 ARHGAP1Q07960 439 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 GRB10Q13322 594 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 LONRF3Q496Y0 759 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 TMEM119Q4V9L6 283 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 NAALADL2Q58DX5 795 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 PRAMEF19Q5SWL8 479 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 KANK3Q6NY19 840 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 MIS18BP1Q6P0N0 1132 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 C4orf19Q8IY42 314 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 PPTC7Q8NI37 304 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 CCDC34Q96HJ3 373 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 PNMA5Q96PV4 448 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 UIMC1Q96RL1 719 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 GPR20Q99678 358 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 ZSWIM4Q9H7M6 989 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 MAGEF1Q9HAY2 307 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 PKD2L1Q9P0L9 805 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 CXXC1Q9P0U4 656 aaPredicted RBP8.95□□□□□ -0.98
COPS3-215ENST00000578317 STK17AQ9UEE5 414 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 ZHX1Q9UKY1 873 aaPredicted RBP8.95□□□□□ -0.98
COPS3-215ENST00000578317 TRIM17Q9Y577 477 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 PCDHB11Q9Y5F2 797 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 PCDHGA11Q9Y5H2 935 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 BRCA2P51587 3418 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 ZSWIM8A7E2V4 1837 aa8.95□□□□□ -0.98
COPS3-215ENST00000578317 GSTTP1A0A1W2PQM5 241 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 KINO60870 393 aaKnown RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 DUSP11O75319 330 aaKnown RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 MED24O75448 989 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 LGR5O75473 907 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 AKR1A1P14550 325 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 CTCFP49711 727 aaPredicted RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 PSMC5P62195 406 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 CACNB2Q08289 660 aaPredicted RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 KARSQ15046 597 aaKnown RBP8.94□□□□□ -0.98
COPS3-215ENST00000578317 ECM1Q16610 540 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 HSDL1Q3SXM5 330 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 TMEM63BQ5T3F8 832 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 KRBA2Q6ZNG9 492 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 PLPPR4Q7Z2D5 763 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 TRPV1Q8NER1 839 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 AFAP1L1Q8TED9 768 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 SPATA33Q96N06 139 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 NACC1Q96RE7 527 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 PANK2Q9BZ23 570 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 KBTBD4Q9NVX7 518 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 RGL1Q9NZL6 768 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 DNM3Q9UQ16 869 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 PTPN22Q9Y2R2 807 aa8.94□□□□□ -0.98
COPS3-215ENST00000578317 MYH7BA7E2Y1 1941 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms