RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ADAM7Q9H2U9 754 aa15.75■□□□□ 0.11
SCARF1-209ENST00000576012 CETN3O15182 167 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 FLOT1O75955 427 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 PPP1R2P41236 205 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 MARCKSL1P49006 195 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 SLC30A10Q6XR72 485 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 TRIM59Q8IWR1 403 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 SLC35G2Q8TBE7 412 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 HOOK2Q96ED9 719 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 DDX23Q9BUQ8 820 aaKnown RBP15.74■□□□□ 0.11
SCARF1-209ENST00000576012 SH3GLB2Q9NR46 395 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 NHSL1Q5SYE7 1610 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 COL1A1P02452 1464 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-209ENST00000576012 IGSF9BQ9UPX0 1349 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 KCPQ6ZWJ8 1503 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 PVALEFA0A1B0GWK0 134 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 KCNA1Q09470 495 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 NBPF20Q3BBV1 942 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 NT5DC3Q86UY8 548 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 SCFD1Q8WVM8 642 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 GANQ9H2C0 597 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 CNOT10Q9H9A5 744 aaKnown RBP15.74■□□□□ 0.11
SCARF1-209ENST00000576012 MAGEF1Q9HAY2 307 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 FAM114A2Q9NRY5 505 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 SPATS2LQ9NUQ6 558 aaKnown RBP15.74■□□□□ 0.11
SCARF1-209ENST00000576012 ARMCX3Q9UH62 379 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-209ENST00000576012 MYH7BA7E2Y1 1941 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 DDX3XO00571 662 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCARF1-209ENST00000576012 RARAP10276 462 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 SLC16A2P36021 539 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 GNAQP50148 359 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 PABPC4Q13310 644 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCARF1-209ENST00000576012 ERFEQ4G0M1 354 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 TMEM237Q96Q45 408 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 RIC8AQ9NPQ8 531 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 TAS2R14Q9NYV8 317 aa15.74■□□□□ 0.11
SCARF1-209ENST00000576012 CHD4Q14839 1912 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 GRIK5Q16478 980 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 DCAF12L1Q5VU92 463 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 ZNF746Q6NUN9 644 aaPredicted RBP15.73■□□□□ 0.11
SCARF1-209ENST00000576012 CPNE8Q86YQ8 564 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 NUCKS1Q9H1E3 243 aaKnown RBP15.73■□□□□ 0.11
SCARF1-209ENST00000576012 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 MINPP1Q9UNW1 487 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 SLC12A4Q9UP95 1085 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 POTEFA5A3E0 1075 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 CCDC169A6NNP5 214 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 RASGRF2O14827 1237 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 POTEIP0CG38 1075 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 CYP4A11Q02928 519 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 IFI16Q16666 785 aaKnown RBP15.73■□□□□ 0.11
SCARF1-209ENST00000576012 POTEGQ6S5H5 508 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 POTEEQ6S8J3 1075 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 BARGINQ6ZT62 677 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 TRMT1LQ7Z2T5 733 aaKnown RBP15.73■□□□□ 0.11
SCARF1-209ENST00000576012 ARMC9Q7Z3E5 817 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 JAMLQ86YT9 394 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 TLCD1Q96CP7 247 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 ARHGEF26Q96DR7 871 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 PWWP2AQ96N64 755 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 ERP44Q9BS26 406 aa15.73■□□□□ 0.11
SCARF1-209ENST00000576012 ZMYND8Q9ULU4 1186 aaPredicted RBP15.73■□□□□ 0.11
SCARF1-209ENST00000576012 PON1P27169 355 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 PCK1P35558 622 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 ANKRD20A2Q5SQ80 823 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 ANKRD20A1Q5TYW2 823 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 ANKRD20A3Q5VUR7 823 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 PALB2Q86YC2 1186 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 CEP120Q8N960 986 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 ALG3Q92685 438 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 DNAJC19Q96DA6 116 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 EPB41L4BQ9H329 900 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 PABPC3Q9H361 631 aaKnown RBP15.72■□□□□ 0.11
SCARF1-209ENST00000576012 ETNK1Q9HBU6 452 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 AIPL1Q9NZN9 384 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 PCDHA12Q9UN75 941 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 ANKRD63C9JTQ0 380 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 CCDC188H7C350 402 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 PLS1Q14651 629 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 ZNF449Q6P9G9 518 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 DGKHQ86XP1 1220 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 CCDC105Q8IYK2 499 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 RAB17Q9H0T7 212 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 EBF2Q9HAK2 575 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 ATMINO43313 823 aaPredicted RBP15.72■□□□□ 0.11
SCARF1-209ENST00000576012 KCNQ2O43526 872 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 GHRP10912 638 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 XRCC5P13010 732 aaKnown RBP15.72■□□□□ 0.11
SCARF1-209ENST00000576012 VPS36Q86VN1 386 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 TBC1D22AQ8WUA7 517 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 RMDN2Q96LZ7 410 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 OSBPL1AQ9BXW6 950 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 RAB34Q9BZG1 259 aa15.72■□□□□ 0.11
SCARF1-209ENST00000576012 TCRBV7S2A1N4TA0A589 114 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 TMEM120BA0PK00 339 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 PAEPP09466 180 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 PLA2G4BP0C869 781 aa15.71■□□□□ 0.11
SCARF1-209ENST00000576012 HIBADHP31937 336 aaKnown RBP15.71■□□□□ 0.11
SCARF1-209ENST00000576012 RPL21P46778 160 aaKnown RBP15.71■□□□□ 0.11
SCARF1-209ENST00000576012 KIAA1755Q5JYT7 1200 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms