RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 WDR64B1ANS9 1081 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 CTAGE8P0CG41 777 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 UCHL3P15374 230 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 LMNB1P20700 586 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 PON1P27169 355 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 CYP2J2P51589 502 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 JAK3P52333 1124 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 CBX1P83916 185 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 KRT76Q01546 638 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 TMEM132BQ14DG7 1078 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 CTAGE6Q86UF2 777 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 CTAGE4Q8IX94 777 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 SPAG5Q96R06 1193 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 AGPAT3Q9NRZ7 376 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 ZNF446Q9NWS9 450 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 ADAMTS5Q9UNA0 930 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 FRMD4BQ9Y2L6 1034 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 NR3C2P08235 984 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 ZSCAN20P17040 1043 aaPredicted RBP15.39■□□□□ 0.05
VPS33B-208ENST00000574755 SFNP31947 248 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 ENOX2Q16206 610 aaKnown RBP15.39■□□□□ 0.05
VPS33B-208ENST00000574755 ASIC2Q16515 512 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 UGCGQ16739 394 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 UTP14CQ5TAP6 766 aaKnown RBP15.39■□□□□ 0.05
VPS33B-208ENST00000574755 XRRA1Q6P2D8 792 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 GBP6Q6ZN66 633 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 CATSPERGQ6ZRH7 1159 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 VSIG10LQ86VR7 867 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 TXLNBQ8N3L3 684 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 TRIM58Q8NG06 486 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 BORCS6Q96GS4 357 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 MKNK1Q9BUB5 465 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 AIPL1Q9NZN9 384 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 GCNT4Q9P109 453 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 KIAA1217Q5T5P2 1943 aa15.39■□□□□ 0.05
VPS33B-208ENST00000574755 ANO9A1A5B4 782 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 TMEM150BA6NC51 233 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 PPP1R37O75864 691 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 LYPLA2O95372 231 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 CCNE2O96020 404 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 PSMC5P62195 406 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 KLHL30Q0D2K2 578 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 KLHDC7AQ5VTJ3 777 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 PAPD7Q5XG87 772 aaKnown RBP15.38■□□□□ 0.05
VPS33B-208ENST00000574755 TMCO3Q6UWJ1 677 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 C4orf19Q8IY42 314 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 GOLGA5Q8TBA6 731 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 TEX13BQ9BXU2 312 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 PARD6BQ9BYG5 372 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 CAPN6Q9Y6Q1 641 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 TACC1O75410 805 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 NOL9Q5SY16 702 aaKnown RBP15.38■□□□□ 0.05
VPS33B-208ENST00000574755 NLRX1Q86UT6 975 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS33B-208ENST00000574755 NSUN6Q8TEA1 469 aaKnown RBP15.38■□□□□ 0.05
VPS33B-208ENST00000574755 STRA6Q9BX79 667 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 MLXIPQ9HAP2 919 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 OGFRQ9NZT2 677 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 AFG3L2Q9Y4W6 797 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 FHOD1Q9Y613 1164 aa15.38■□□□□ 0.05
VPS33B-208ENST00000574755 RBAK-RBAKDNI3L0D1 243 aa15.37■□□□□ 0.05
VPS33B-208ENST00000574755 SRGAP2O75044 1071 aa15.37■□□□□ 0.05
VPS33B-208ENST00000574755 TUBB4BP68371 445 aa15.37■□□□□ 0.05
VPS33B-208ENST00000574755 DPY19L2P1Q6NXN4 242 aa15.37■□□□□ 0.05
VPS33B-208ENST00000574755 GPRASP2Q96D09 838 aa15.37■□□□□ 0.05
VPS33B-208ENST00000574755 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS33B-208ENST00000574755 ACAD9Q9H845 621 aa15.37■□□□□ 0.05
VPS33B-208ENST00000574755 LUC7LQ9NQ29 371 aaKnown RBP15.37■□□□□ 0.05
VPS33B-208ENST00000574755 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
VPS33B-208ENST00000574755 MYH10P35580 1976 aa15.37■□□□□ 0.05
VPS33B-208ENST00000574755 GTPBP10A4D1E9 387 aaKnown RBP15.36■□□□□ 0.05
VPS33B-208ENST00000574755 BACH1O14867 736 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 ATP2A1O14983 1001 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 EXOC3O60645 756 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 MOCS3O95396 460 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 PLS3P13797 630 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 SLC18A3Q16572 532 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 ANKRD13CQ8N6S4 541 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 DRC1Q96MC2 740 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 ALS2CR12Q96Q35 445 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 DMAC2Q9NW81 257 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 HOXC10Q9NYD6 342 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 CYP39A1Q9NYL5 469 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 SPDYE16A6NNV3 312 aaPredicted RBP15.36■□□□□ 0.05
VPS33B-208ENST00000574755 MAFGO15525 162 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 PJA2O43164 708 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 MAPTP10636 758 aaKnown RBP15.36■□□□□ 0.05
VPS33B-208ENST00000574755 ALCAMQ13740 583 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 XKR9Q5GH70 373 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 PLA2G4FQ68DD2 849 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 INPP4AQ96PE3 977 aaPredicted RBP15.36■□□□□ 0.05
VPS33B-208ENST00000574755 TMEM206Q9H813 350 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 A1CFQ9NQ94 594 aaKnown RBP15.36■□□□□ 0.05
VPS33B-208ENST00000574755 ADAMTS1Q9UHI8 967 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 JRKLQ9Y4A0 524 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 SBF1O95248 1867 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 WDR81Q562E7 1941 aa15.36■□□□□ 0.05
VPS33B-208ENST00000574755 USP2O75604 605 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-208ENST00000574755 ZNF746Q6NUN9 644 aaPredicted RBP15.35■□□□□ 0.05
VPS33B-208ENST00000574755 RDH13Q8NBN7 331 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms