RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TAF6LQ9Y6J9 622 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 GVINP1Q7Z2Y8 2422 aa13.92□□□□□ -0.18
PRPF8-208ENST00000573716 MYO15AQ9UKN7 3530 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 E7EWF7 191 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 MAFGO15525 162 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 PLEKHA8P1O95397 391 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 CYP21A2P08686 494 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 PPM1AP35813 382 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 ITIH3Q06033 890 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 SMC1AQ14683 1233 aaKnown RBP13.91□□□□□ -0.18
PRPF8-208ENST00000573716 KANK3Q6NY19 840 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 NFXL1Q6ZNB6 911 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
PRPF8-208ENST00000573716 FAM228AQ86W67 206 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 KIAA0319LQ8IZA0 1049 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 CYP2W1Q8TAV3 490 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 TMEM117Q9H0C3 514 aa13.91□□□□□ -0.18
PRPF8-208ENST00000573716 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 CLASP2O75122 1294 aaKnown RBP13.9□□□□□ -0.18
PRPF8-208ENST00000573716 ARP10275 920 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 CLCN5P51795 746 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 FAM160B1Q5W0V3 765 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 LRRC55Q6ZSA7 311 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 HEATR3Q7Z4Q2 680 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 RAB11FIP4Q86YS3 637 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 CKAP2LQ8IYA6 745 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 SRBD1Q8N5C6 995 aaKnown RBP13.9□□□□□ -0.18
PRPF8-208ENST00000573716 METTL13Q8N6R0 699 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 PGBD1Q96JS3 809 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 CASD1Q96PB1 797 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 MXRA8Q9BRK3 442 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 LZTS2Q9BRK4 669 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 OSBPL3Q9H4L5 887 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 FBXL21Q9UKT6 434 aa13.9□□□□□ -0.18
PRPF8-208ENST00000573716 C2orf71A6NGG8 1288 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 HOXA2O43364 376 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 HBP1O60381 514 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 DDAH1O94760 285 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 CXCL14O95715 111 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 VTNP04004 478 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 RXRAP19793 462 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 GNAQP50148 359 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 CRYBB1P53674 252 aaPredicted RBP13.89□□□□□ -0.19
PRPF8-208ENST00000573716 ANTXR2P58335 489 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 PTH1RQ03431 593 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 BMS1Q14692 1282 aaKnown RBP13.89□□□□□ -0.19
PRPF8-208ENST00000573716 ATAT1Q5SQI0 421 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 PDXDC2PQ6P474 469 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 MRPL43Q8N983 215 aaKnown RBP13.89□□□□□ -0.19
PRPF8-208ENST00000573716 IGDCC4Q8TDY8 1250 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
PRPF8-208ENST00000573716 ELAC1Q9H777 363 aaKnown RBP13.89□□□□□ -0.19
PRPF8-208ENST00000573716 WDR87Q6ZQQ6 2873 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 NFASCO94856 1347 aa13.89□□□□□ -0.19
PRPF8-208ENST00000573716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.88□□□□□ -0.19
PRPF8-208ENST00000573716 NT5C1B-RDH14C9J2C7 533 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 STK25O00506 426 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 PI15O43692 258 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 ZNF76P36508 570 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 SLC26A2P50443 739 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 METAP2P50579 478 aaKnown RBP eCLIP13.88□□□□□ -0.19
PRPF8-208ENST00000573716 FAM189BP81408 668 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 NUCB1Q02818 461 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 ITGB3BPQ13352 177 aaPredicted RBP13.88□□□□□ -0.19
PRPF8-208ENST00000573716 DSC3Q14574 896 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 CWF19L1Q69YN2 538 aaKnown RBP13.88□□□□□ -0.19
PRPF8-208ENST00000573716 CASC1Q6TDU7 716 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 SMC5Q8IY18 1101 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 ZDHHC14Q8IZN3 488 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 AUTS2Q8WXX7 1259 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 LY9Q9HBG7 655 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 AGO4Q9HCK5 861 aaKnown RBP13.88□□□□□ -0.19
PRPF8-208ENST00000573716 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 VPS13AQ96RL7 3174 aa13.88□□□□□ -0.19
PRPF8-208ENST00000573716 MYH9P35579 1960 aaKnown RBP13.87□□□□□ -0.19
PRPF8-208ENST00000573716 COL1A2P08123 1366 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 EPCAMP16422 314 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 ZSCAN20P17040 1043 aaPredicted RBP13.87□□□□□ -0.19
PRPF8-208ENST00000573716 RFX1P22670 979 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 SMARCA1P28370 1054 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 KIAA1841Q6NSI8 718 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 TMC5Q6UXY8 1006 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 CCDC60Q8IWA6 550 aaPredicted RBP13.87□□□□□ -0.19
PRPF8-208ENST00000573716 SLC39A11Q8N1S5 342 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 HELQQ8TDG4 1101 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 ZNF668Q96K58 619 aaPredicted RBP13.87□□□□□ -0.19
PRPF8-208ENST00000573716 SCLT1Q96NL6 688 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 MAP3K14Q99558 947 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 HINFPQ9BQA5 517 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 CYP26B1Q9NR63 512 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 DZANK1Q9NVP4 752 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 AKT3Q9Y243 479 aa13.87□□□□□ -0.19
PRPF8-208ENST00000573716 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms