RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 INF2Q27J81 1249 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 RPUSD3Q6P087 351 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 POMZP3Q6PJE2 187 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 CRTC1Q6UUV9 634 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 CCBE1Q6UXH8 406 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 TRIM67Q6ZTA4 783 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 SLC9B2Q86UD5 537 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 IQCF2Q8IXL9 164 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 EFHBQ8N7U6 833 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 ATG16L2Q8NAA4 619 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 CHST14Q8NCH0 376 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 GOT1L1Q8NHS2 421 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 AIDAQ96BJ3 306 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 RRP36Q96EU6 259 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 MRGPRX3Q96LB0 322 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 CCDC140Q96MF4 163 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 UROC1Q96N76 676 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 CDK15Q96Q40 435 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 C7orf25Q9BPX7 421 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 SLX1AQ9BQ83 275 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 GBP3Q9H0R5 595 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 SPON1Q9HCB6 807 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 CCM2LQ9NUG4 571 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 TRMT1Q9NXH9 659 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 PGPEP1Q9NXJ5 209 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 KCTD5Q9NXV2 234 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 HOXC10Q9NYD6 342 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 LRFN1Q9P244 771 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 APEX2Q9UBZ4 518 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 PCSK1NQ9UHG2 260 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 ATAD2BQ9ULI0 1458 aa5.62□□□□□ -1.51
TOPBP1-210ENST00000572787 POM121BA6NF01 834 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 METTL12A8MUP2 240 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 GFRA2O00451 464 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 WFS1O76024 890 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 GOSR1O95249 250 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 ADH1AP07327 375 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF865P0CJ78 1059 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 SFTPCP11686 197 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 MYF5P13349 255 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 HDCP19113 662 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 PLCG1P19174 1290 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 IL11P20809 199 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 CHMP24386 653 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 HTR1BP28222 390 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 VAMP2P63027 116 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 GALNT1Q10472 559 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 AP1B1Q10567 949 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 SEMA3AQ14563 771 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 PGS1Q32NB8 556 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 TMEM201Q5SNT2 666 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 ALKBH5Q6P6C2 394 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 BICDL1Q6ZP65 573 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 FAM47EQ6ZV65 393 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 RPAP2Q8IXW5 612 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 TRMT2AQ8IZ69 625 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF619Q8N2I2 560 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 PRR18Q8N4B5 295 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 LRRC71Q8N4P6 559 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 TCP11L2Q8N4U5 519 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 PPP1R14CQ8TAE6 165 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 ZNF606Q8WXB4 792 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 NSUN4Q96CB9 384 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 APIPQ96GX9 242 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 RBM18Q96H35 190 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 CCDC43Q96MW1 224 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 PASKQ96RG2 1323 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 YME1L1Q96TA2 773 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 GAS2L1Q99501 681 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 COLEC11Q9BWP8 271 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 KLHL25Q9H0H3 589 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 SIL1Q9H173 461 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 NOL6Q9H6R4 1146 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 CNTD2Q9H8S5 307 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 MBIPQ9NS73 344 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 KRT84Q9NSB2 600 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 TMOD4Q9NZQ9 345 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 SH3BGRL2Q9UJC5 107 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 NOC2LQ9Y3T9 749 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 TRAF6Q9Y4K3 522 aa5.61□□□□□ -1.51
TOPBP1-210ENST00000572787 TDRD9Q8NDG6 1382 aaKnown RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 FLT1P17948 1338 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 TBX1O43435 398 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 PPM1BO75688 479 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 KIAA0754O94854 1291 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 RTN3O95197 1032 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 TP53P04637 393 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 ADRB2P07550 413 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 SRGAP2BP0DMP2 458 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 HOXC12P31275 282 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 GRM5P41594 1212 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 POLD2P49005 469 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 ALDH3A2P51648 485 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 ITGA8P53708 1063 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 CASP6P55212 293 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 COPS2P61201 443 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 INSM1Q01101 510 aaPredicted RBP5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 PDE4BQ07343 736 aa5.6□□□□□ -1.51
TOPBP1-210ENST00000572787 EFR3AQ14156 821 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms