RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 EYA4O95677 639 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 KCNA2P16389 499 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 CIITAP33076 1130 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 MCM7P33993 719 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 ANP32AP39687 249 aaKnown RBP15□□□□□ -0.01
CCDC40-205ENST00000571028 NBR1Q14596 966 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 ZNF174Q15697 407 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 ZBTB33Q86T24 672 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 RPGRIP1Q96KN7 1286 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 RNPEPQ9H4A4 650 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 ALG13Q9NP73 1137 aaKnown RBP15□□□□□ -0.01
CCDC40-205ENST00000571028 DAXXQ9UER7 740 aaPredicted RBP15□□□□□ -0.01
CCDC40-205ENST00000571028 NOL7Q9UMY1 257 aaKnown RBP15□□□□□ -0.01
CCDC40-205ENST00000571028 TELO2Q9Y4R8 837 aa15□□□□□ -0.01
CCDC40-205ENST00000571028 LOC730098B7Z3J9 87 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 WNT7AO00755 349 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 MSH4O15457 936 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 MAFGO15525 162 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 STX6O43752 255 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 LGALS2P05162 132 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 U2AF2P26368 475 aaKnown RBP eCLIP14.99□□□□□ -0.01
CCDC40-205ENST00000571028 VCPP55072 806 aaKnown RBP14.99□□□□□ -0.01
CCDC40-205ENST00000571028 SETQ01105 290 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-205ENST00000571028 ITGB3BPQ13352 177 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-205ENST00000571028 UTP14CQ5TAP6 766 aaKnown RBP14.99□□□□□ -0.01
CCDC40-205ENST00000571028 NIPA1Q7RTP0 329 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 SMRP1Q8NCR6 262 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 CLP1Q92989 425 aaKnown RBP14.99□□□□□ -0.01
CCDC40-205ENST00000571028 MSLNLQ96KJ4 702 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 SETD4Q9NVD3 440 aa14.99□□□□□ -0.01
CCDC40-205ENST00000571028 ZNF215Q9UL58 517 aaPredicted RBP14.99□□□□□ -0.01
CCDC40-205ENST00000571028 TRIOO75962 3097 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 IPO5O00410 1097 aaKnown RBP14.98□□□□□ -0.01
CCDC40-205ENST00000571028 GHRP10912 638 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 GCFC2P16383 781 aaKnown RBP14.98□□□□□ -0.01
CCDC40-205ENST00000571028 AVPR2P30518 371 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 HOXC8P31273 242 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 COASYQ13057 564 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 TTC38Q5R3I4 469 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 EFHBQ8N7U6 833 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 GIMAP8Q8ND71 665 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-205ENST00000571028 LENG9Q96B70 501 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 NAP1L4Q99733 375 aaKnown RBP14.98□□□□□ -0.01
CCDC40-205ENST00000571028 PHF7Q9BWX1 381 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-205ENST00000571028 OSBPL7Q9BZF2 842 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 TCEAL9Q9UHQ7 104 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 PLAGL2Q9UPG8 496 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 USP15Q9Y4E8 981 aaPredicted RBP14.98□□□□□ -0.01
CCDC40-205ENST00000571028 C5orf42Q9H799 3197 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 MYH7BA7E2Y1 1941 aa14.98□□□□□ -0.01
CCDC40-205ENST00000571028 RALGAPA2Q2PPJ7 1873 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 CYP3A7-CYP3A51PA0A087WV96 503 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 H0Y858 1186 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 CHMP2AO43633 222 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 CYP3A7P24462 503 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 NRIP1P48552 1158 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 CBX2Q14781 532 aaPredicted RBP14.97□□□□□ -0.01
CCDC40-205ENST00000571028 Q4G0T1 1027 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 NAALADL2Q58DX5 795 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 MOXD1Q6UVY6 613 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 METTL7BQ6UX53 244 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 RBM23Q86U06 439 aaKnown RBP14.97□□□□□ -0.01
CCDC40-205ENST00000571028 RSPH3Q86UC2 560 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 P2RX5Q93086 422 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 SENP7Q9BQF6 1050 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 JPH1Q9HDC5 661 aaPredicted RBP14.97□□□□□ -0.01
CCDC40-205ENST00000571028 TLR9Q9NR96 1032 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 TSHZ2Q9NRE2 1034 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 SLC9A2Q9UBY0 812 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 BARX2Q9UMQ3 279 aaPredicted RBP14.97□□□□□ -0.01
CCDC40-205ENST00000571028 MTMR6Q9Y217 621 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 TECTAO75443 2155 aa14.97□□□□□ -0.01
CCDC40-205ENST00000571028 CFAP54Q96N23 3096 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 KIAA1217Q5T5P2 1943 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 GAS7O60861 476 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 BAG4O95429 457 aaKnown RBP14.96□□□□□ -0.01
CCDC40-205ENST00000571028 LINC00271P0C7V0 271 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 CALCRLQ16602 461 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 FOXD4L6Q3SYB3 417 aaPredicted RBP14.96□□□□□ -0.01
CCDC40-205ENST00000571028 FAM26DQ5JW98 314 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 LRCH2Q5VUJ6 765 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 PPP4R3AQ6IN85 833 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 FAM173BQ6P4H8 233 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 FOXD4L3Q6VB84 417 aaPredicted RBP14.96□□□□□ -0.01
CCDC40-205ENST00000571028 NLRC5Q86WI3 1866 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 MICAL1Q8TDZ2 1067 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 MBOAT7Q96N66 472 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 GPR20Q99678 358 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 TEKT3Q9BXF9 490 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 CLEC1BQ9P126 229 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 SAMM50Q9Y512 469 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 PCDHB6Q9Y5E3 794 aa14.96□□□□□ -0.01
CCDC40-205ENST00000571028 ZFHX2Q9C0A1 2572 aaPredicted RBP14.96□□□□□ -0.01
CCDC40-205ENST00000571028 NEMFO60524 1076 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 TXKP42681 527 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
CCDC40-205ENST00000571028 NUBP1P53384 320 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 ACTR2P61160 394 aa14.95□□□□□ -0.02
CCDC40-205ENST00000571028 RESTQ13127 1097 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms