RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 GRIP2Q9C0E4 1043 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 KCNH7Q9NS40 1196 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 TBX21Q9UL17 535 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 PCDHA4Q9UN74 947 aa10.45□□□□□ -0.74
CAPN3-219ENST00000569136 GNAT1P11488 350 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 PTGS1P23219 599 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 CIITAP33076 1130 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 PSMC6P62333 389 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 ARHGAP4P98171 946 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 RABEP1Q15276 862 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 ME3Q16798 604 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 HSDL1Q3SXM5 330 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 TBCELQ5QJ74 424 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 RPUSD2Q8IZ73 545 aaKnown RBP10.44□□□□□ -0.74
CAPN3-219ENST00000569136 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 STK32AQ8WU08 396 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 KAT2BQ92831 832 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 BADQ92934 168 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 SDF4Q9BRK5 362 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 TRPV6Q9H1D0 765 aa10.44□□□□□ -0.74
CAPN3-219ENST00000569136 STK36Q9NRP7 1315 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 H3BRB1 525 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 HAS3O00219 553 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 ATP9AO75110 1047 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 F2P00734 622 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 KCNA2P16389 499 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 FPGSQ05932 587 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 PPIGQ13427 754 aaKnown RBP eCLIP10.43□□□□□ -0.74
CAPN3-219ENST00000569136 BFSP2Q13515 415 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 KIAA0753Q2KHM9 967 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 FAM47CQ5HY64 1035 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 TDHQ8IZJ6 230 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 BLIDQ8IZY5 108 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 DAGLBQ8NCG7 672 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 GTF3C6Q969F1 213 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 GPR20Q99678 358 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 LLPHQ9BRT6 129 aaKnown RBP10.43□□□□□ -0.74
CAPN3-219ENST00000569136 C16orf70Q9BSU1 422 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 HIPK3Q9H422 1215 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 TUT1Q9H6E5 874 aaKnown RBP10.43□□□□□ -0.74
CAPN3-219ENST00000569136 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-219ENST00000569136 TBC1D22BQ9NU19 505 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 TMEM260Q9NX78 707 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 VPS54Q9P1Q0 977 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 ORC3Q9UBD5 711 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-219ENST00000569136 ZNF215Q9UL58 517 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-219ENST00000569136 ZMIZ1Q9ULJ6 1067 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 HRH3Q9Y5N1 445 aa10.43□□□□□ -0.74
CAPN3-219ENST00000569136 NFASCO94856 1347 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 B4GALT4O60513 344 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 DKK1O94907 266 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 PARNO95453 639 aaKnown RBP10.42□□□□□ -0.74
CAPN3-219ENST00000569136 MCM2P49736 904 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 SETQ01105 290 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-219ENST00000569136 PTGISQ16647 500 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 LRIT3Q3SXY7 679 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 TAS1R3Q7RTX0 852 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 KRT25Q7Z3Z0 450 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 PLA2G4DQ86XP0 818 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 CCDC155Q8N6L0 562 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 CYP2W1Q8TAV3 490 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 CAGE1Q8TC20 777 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 CRYGNQ8WXF5 182 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 SMARCAD1Q9H4L7 1026 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 AGO4Q9HCK5 861 aaKnown RBP10.42□□□□□ -0.74
CAPN3-219ENST00000569136 BRMS1Q9HCU9 246 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 JPH1Q9HDC5 661 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-219ENST00000569136 TRMT13Q9NUP7 481 aaKnown RBP10.42□□□□□ -0.74
CAPN3-219ENST00000569136 SLC9A2Q9UBY0 812 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 DNAH12Q6ZR08 3092 aa10.42□□□□□ -0.74
CAPN3-219ENST00000569136 RANBP2P49792 3224 aaKnown RBP10.41□□□□□ -0.74
CAPN3-219ENST00000569136 CYP3A7-CYP3A51PA0A087WV96 503 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 PPFIA3O75145 1194 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 CTDNEP1O95476 244 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 LGALS2P05162 132 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 CYP3A7P24462 503 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 ITGB8P26012 769 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 RFC2P35250 354 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 SLC26A2P50443 739 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 CHMP4BP1P59074 171 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 TRIM29Q14134 588 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 ELOAQ14241 798 aaKnown RBP10.41□□□□□ -0.74
CAPN3-219ENST00000569136 NECAB1Q8N987 351 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 RHBDD1Q8TEB9 315 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 PGBD1Q96JS3 809 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 KIF2CQ99661 725 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 NAP1L4Q99733 375 aaKnown RBP10.41□□□□□ -0.74
CAPN3-219ENST00000569136 ALG1Q9BT22 464 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 NOC4LQ9BVI4 516 aaKnown RBP10.41□□□□□ -0.74
CAPN3-219ENST00000569136 AZI2Q9H6S1 392 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 BCAS3Q9H6U6 928 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 ERAP1Q9NZ08 941 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 HDAC6Q9UBN7 1215 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 GTF2IRD1Q9UHL9 959 aa10.41□□□□□ -0.74
CAPN3-219ENST00000569136 NRCAMQ92823 1304 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 CCDC194A0A1B0GVG4 234 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 GSTTP1A0A1W2PQM5 241 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 C17orf102A2RUQ5 167 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 FAM86B1E9PN63 330 aa10.4□□□□□ -0.74
CAPN3-219ENST00000569136 M0R2N6 131 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms