RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 ASPAP45381 313 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 DYNLL1P63167 89 aaKnown RBP6.83□□□□□ -1.32
CDH13-211ENST00000568770 MRPS5P82675 430 aaKnown RBP6.83□□□□□ -1.32
CDH13-211ENST00000568770 ABCB5Q2M3G0 1257 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 CERKLQ49MI3 558 aaPredicted RBP6.83□□□□□ -1.32
CDH13-211ENST00000568770 WIPI1Q5MNZ9 446 aaPredicted RBP6.83□□□□□ -1.32
CDH13-211ENST00000568770 AKNAD1Q5T1N1 836 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 CCDC129Q6ZRS4 1044 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 CYFIP1Q7L576 1253 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 UBE3DQ7Z6J8 389 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 RNF180Q86T96 592 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 FAM9BQ8IZU0 186 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 TP53INP1Q96A56 240 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 MAML3Q96JK9 1138 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 MEIS3Q99687 375 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 SPOCK3Q9BQ16 436 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDH13-211ENST00000568770 TGIF2Q9GZN2 237 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 SPATC1LQ9H0A9 340 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 PRDM12Q9H4Q4 367 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 XPNPEP3Q9NQH7 507 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 SLC5A4Q9NY91 659 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 HDAC5Q9UQL6 1122 aa6.83□□□□□ -1.32
CDH13-211ENST00000568770 LRRC37A2A6NM11 1700 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 TRIOO75962 3097 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 GRXCR1A8MXD5 290 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 TIMP1P01033 207 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 UQCRFS1P1P0C7P4 283 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 BMP3P12645 472 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 RPL6Q02878 288 aaKnown RBP6.82□□□□□ -1.32
CDH13-211ENST00000568770 PAK2Q13177 524 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 PLS1Q14651 629 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 TTLL4Q14679 1199 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 COG2Q14746 738 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 ALDH1L2Q3SY69 923 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 C16orf59Q7L2K0 433 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 ANKRD33Q7Z3H0 272 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 SLC44A5Q8NCS7 719 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 SHCBP1Q8NEM2 672 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 FBLIM1Q8WUP2 373 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 MYRFLQ96LU7 910 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 TANGO6Q9C0B7 1094 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 MROH8Q9H579 483 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 SMC4Q9NTJ3 1288 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 HOXC10Q9NYD6 342 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 SERPINB13Q9UIV8 391 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 NOB1Q9ULX3 412 aaKnown RBP6.82□□□□□ -1.32
CDH13-211ENST00000568770 POLR3KQ9Y2Y1 108 aaPredicted RBP6.82□□□□□ -1.32
CDH13-211ENST00000568770 SUPT16HQ9Y5B9 1047 aaKnown RBP6.82□□□□□ -1.32
CDH13-211ENST00000568770 CORINQ9Y5Q5 1042 aa6.82□□□□□ -1.32
CDH13-211ENST00000568770 PRRC2BQ5JSZ5 2229 aaKnown RBP6.81□□□□□ -1.32
CDH13-211ENST00000568770 A0A1W2PRG0 241 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 PGK2P07205 417 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 FCER1AP12319 257 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 TAL1P17542 331 aaPredicted RBP6.81□□□□□ -1.32
CDH13-211ENST00000568770 GUCY1A2P33402 732 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 SHMT1P34896 483 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 ACLYP53396 1101 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 MTX1Q13505 466 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 SEPT2Q15019 361 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 TTC39AQ5SRH9 613 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 TMEM240Q5SV17 173 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 MFSD5Q6N075 450 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 FAM20CQ8IXL6 584 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 ABRAQ8N0Z2 381 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 MIGA1Q8NAN2 632 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 UTP4Q969X6 686 aaKnown RBP6.81□□□□□ -1.32
CDH13-211ENST00000568770 ELMO3Q96BJ8 720 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 TOX2Q96NM4 488 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 NT5C1AQ9BXI3 368 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 C1QTNF1Q9BXJ1 281 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 ACSS3Q9H6R3 686 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 CABP5Q9NP86 173 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 MYH4Q9Y623 1939 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 SCN5AQ14524 2016 aa6.81□□□□□ -1.32
CDH13-211ENST00000568770 MUC6Q6W4X9 2439 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 PRAMEF27A3QJZ7 478 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 RBAK-RBAKDNI3L0D1 243 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 MPHOSPH10O00566 681 aaKnown RBP6.8□□□□□ -1.32
CDH13-211ENST00000568770 DYNC1LI2O43237 492 aaPredicted RBP6.8□□□□□ -1.32
CDH13-211ENST00000568770 ADAMTS4O75173 837 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 NFICP08651 508 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 ACRP10323 421 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 CSF2RAP15509 400 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 RAB6AP20340 208 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 CYP7A1P22680 504 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 PLCD1P51178 756 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 TFF2Q03403 129 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 G3BP1Q13283 466 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDH13-211ENST00000568770 SEZ6Q53EL9 994 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 KIAA1755Q5JYT7 1200 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 CCDC158Q5M9N0 1113 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 ZNF365Q70YC5 407 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 HDXQ7Z353 690 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 TTC6Q86TZ1 520 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 MB21D1Q8N884 522 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 NUP133Q8WUM0 1156 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 TINF2Q9BSI4 451 aa6.8□□□□□ -1.32
CDH13-211ENST00000568770 API5Q9BZZ5 524 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms