RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 ZNF449Q6P9G9 518 aa21.46■■□□□ 1.03
AC009041.2-204ENST00000568394 FGFBP2Q9BYJ0 223 aa21.46■■□□□ 1.03
AC009041.2-204ENST00000568394 PCDHGC5Q9Y5F6 944 aa21.46■■□□□ 1.03
AC009041.2-204ENST00000568394 FLOT1O75955 427 aa21.45■■□□□ 1.03
AC009041.2-204ENST00000568394 PPP1R2P41236 205 aa21.45■■□□□ 1.03
AC009041.2-204ENST00000568394 ZYXQ15942 572 aaKnown RBP21.45■■□□□ 1.03
AC009041.2-204ENST00000568394 SEPT14Q6ZU15 432 aa21.45■■□□□ 1.03
AC009041.2-204ENST00000568394 KCNK18Q7Z418 384 aa21.45■■□□□ 1.03
AC009041.2-204ENST00000568394 LONP2Q86WA8 852 aa21.45■■□□□ 1.03
AC009041.2-204ENST00000568394 RAB17Q9H0T7 212 aa21.45■■□□□ 1.03
AC009041.2-204ENST00000568394 C6orf50Q9HD87 102 aa21.45■■□□□ 1.03
AC009041.2-204ENST00000568394 NOL4O94818 638 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 SEPT12Q8IYM1 358 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 PCDHB13Q9Y5F0 798 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 SIPA1L3O60292 1781 aaPredicted RBP21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 RASGRF2O14827 1237 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 SUN1O94901 812 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 POLE2P56282 527 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 ANKRD20A2Q5SQ80 823 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 ANKRD20A1Q5TYW2 823 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 ANKRD20A3Q5VUR7 823 aa21.45■■□□□ 1.02
AC009041.2-204ENST00000568394 CTCFP49711 727 aaPredicted RBP21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 GUF1Q8N442 669 aaKnown RBP21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 IFT74Q96LB3 600 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 TSC22D3Q99576 134 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 ADAM33Q9BZ11 813 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 CUEDC2Q9H467 287 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 LCA5LO95447 670 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 NR2F2P24468 414 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 LRRC63Q05C16 580 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 KCTD1Q719H9 257 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 NUCKS1Q9H1E3 243 aaKnown RBP21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 BATF3Q9NR55 127 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 IL17RBQ9NRM6 502 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 NARFQ9UHQ1 456 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 GHRP10912 638 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 UBE2SQ16763 222 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 FBF1Q8TES7 1133 aa21.44■■□□□ 1.02
AC009041.2-204ENST00000568394 GRB10Q13322 594 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 ARHGAP44Q17R89 818 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 CCDC105Q8IYK2 499 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 SCFD2Q8WU76 684 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 P3H4Q92791 437 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 CETN3O15182 167 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 CLIC2O15247 247 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 SERPINB2P05120 415 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 CREB1P16220 341 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 COASYQ13057 564 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 LRRC55Q6ZSA7 311 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 TPCN2Q8NHX9 752 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 PIGSQ96S52 555 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 EYA3Q99504 573 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 NAGPAQ9UK23 515 aa21.43■■□□□ 1.02
AC009041.2-204ENST00000568394 E9PMD0 336 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 MSH2P43246 934 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 RAD23BP54727 409 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 EXOC3L4Q17RC7 722 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 REXO1Q8N1G1 1221 aaKnown RBP21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 ATRNO75882 1429 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 CFAP73A6NFT4 308 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 CCDC188H7C350 402 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 KCNJ1P48048 391 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 PDE6CP51160 858 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 NCALDP61601 193 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 TRIP13Q15645 432 aaPredicted RBP21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 INTS8Q75QN2 995 aaKnown RBP21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 GLYCTKQ8IVS8 523 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 AK8Q96MA6 479 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 MMTAG2Q9BU76 263 aaKnown RBP21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 RAB34Q9BZG1 259 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 MTRF1LQ9UGC7 380 aaKnown RBP21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 HDAC9Q9UKV0 1011 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 USP15Q9Y4E8 981 aaPredicted RBP21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 FLT1P17948 1338 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 BAZ2AQ9UIF9 1905 aaKnown RBP21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 C5orf60A6NFR6 353 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 USP17L5A8MUK1 530 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 CYTH3O43739 400 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 STX2P32856 288 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 KRT25Q7Z3Z0 450 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 C18orf8Q96DM3 657 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 BLOC1S4Q9NUP1 217 aa21.42■■□□□ 1.02
AC009041.2-204ENST00000568394 CCDC6Q16204 474 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 TTBK2Q6IQ55 1244 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 DPP8Q6V1X1 898 aaPredicted RBP21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 C3orf20Q8ND61 904 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 MAGEC3Q8TD91 643 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 MTA3Q9BTC8 594 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 KIAA1024Q9UPX6 916 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 KIF3CO14782 793 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 RPS6KA4O75676 772 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 GNAT1P11488 350 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 EIF3BP55884 814 aaKnown RBP21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 CCHCR1Q8TD31 782 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 CTNNBL1Q8WYA6 563 aaPredicted RBP21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 RNF25Q96BH1 459 aaPredicted RBP21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 TMEM237Q96Q45 408 aa21.41■■□□□ 1.02
AC009041.2-204ENST00000568394 NEFHP12036 1026 aa21.4■■□□□ 1.02
AC009041.2-204ENST00000568394 PRR5LQ6MZQ0 368 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms