RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 DDX11L8A8MPP1 907 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 ST18O60284 1047 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 HBP1O60381 514 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 STBD1O95210 358 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 C22orf31O95567 290 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 VTNP04004 478 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 KCNA5P22460 613 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 CD52P31358 61 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 CLCN3P51790 818 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 MRPS6P82932 125 aaKnown RBP10.7□□□□□ -0.7
SF3B3-211ENST00000568291 HTRA4P83105 476 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-211ENST00000568291 MGAT3Q09327 533 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 ZNF174Q15697 407 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 TIGD5Q53EQ6 642 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 TMEM31Q5JXX7 168 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 NCAPH2Q6IBW4 605 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 PPP4R3AQ6IN85 833 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 TAF2Q6P1X5 1199 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 SMAP1Q8IYB5 467 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-211ENST00000568291 KIAA0319LQ8IZA0 1049 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.76e-9■■□□□ 12.1
SF3B3-211ENST00000568291 MRPL38Q96DV4 380 aaKnown RBP10.7□□□□□ -0.7
SF3B3-211ENST00000568291 SAMD11Q96NU1 681 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 LLPHQ9BRT6 129 aaKnown RBP10.7□□□□□ -0.7
SF3B3-211ENST00000568291 LRFN3Q9BTN0 628 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 BRMS1Q9HCU9 246 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 KCNMB3Q9NPA1 279 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 SH2B1Q9NRF2 756 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-211ENST00000568291 BMP2KQ9NSY1 1161 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-211ENST00000568291 RGL1Q9NZL6 768 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 WRAP73Q9P2S5 460 aaPredicted RBP10.7□□□□□ -0.7
SF3B3-211ENST00000568291 VAV3Q9UKW4 847 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 PCDHA2Q9Y5H9 948 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 TTC3P53804 2025 aa10.7□□□□□ -0.7
SF3B3-211ENST00000568291 XIRP2A4UGR9 3374 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-211ENST00000568291 FAM86C2PA6NEL3 165 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 OATP04181 439 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 MCM7P33993 719 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 TXKP42681 527 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 CYP4A11Q02928 519 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 DRP2Q13474 957 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 CTTNQ14247 550 aaKnown RBP10.69□□□□□ -0.7
SF3B3-211ENST00000568291 PTPROQ16827 1216 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 KIZQ2M2Z5 673 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 LEXMQ3ZCV2 418 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 MTERF2Q49AM1 385 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 EPC2Q52LR7 807 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 ZNF484Q5JVG2 852 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 FAM26DQ5JW98 314 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 PLA2G4FQ68DD2 849 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 MOXD1Q6UVY6 613 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 B3GNT9Q6UX72 402 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 RSPH3Q86UC2 560 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 FAM177A1Q8N128 213 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-211ENST00000568291 FBXO18Q8NFZ0 1043 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 TMEM40Q8WWA1 233 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
SF3B3-211ENST00000568291 IFIH1Q9BYX4 1025 aaKnown RBP10.69□□□□□ -0.7
SF3B3-211ENST00000568291 TMEM60Q9H2L4 133 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 CD320Q9NPF0 282 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 NRBP2Q9NSY0 501 aa10.69□□□□□ -0.7
SF3B3-211ENST00000568291 IGSF9BQ9UPX0 1349 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-211ENST00000568291 SMIM35A0A1B0GVV1 85 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 CSDE1O75534 798 aaKnown RBP10.68□□□□□ -0.7
SF3B3-211ENST00000568291 SFNP31947 248 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 SLC26A2P50443 739 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 JAK3P52333 1124 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 NPEPPSP55786 919 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 GNL2Q13823 731 aaKnown RBP10.68□□□□□ -0.7
SF3B3-211ENST00000568291 SAFBQ15424 915 aaKnown RBP eCLIP10.68□□□□□ -0.7
SF3B3-211ENST00000568291 FBXO47Q5MNV8 452 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 EFCAB12Q6NXP0 572 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 RTN4RL1Q86UN2 441 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-211ENST00000568291 APBB2Q92870 758 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 DYDC2Q96IM9 177 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
SF3B3-211ENST00000568291 C11orf16Q9NQ32 467 aa10.68□□□□□ -0.7
SF3B3-211ENST00000568291 SEPT9Q9UHD8 586 aaPredicted RBP10.68□□□□□ -0.7
SF3B3-211ENST00000568291 ENPP3O14638 875 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 IL9P15248 144 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 GCFC2P16383 781 aaKnown RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 FGFR4P22455 802 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 GJB2P29033 226 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 SSTR3P32745 418 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 CTNNB1P35222 781 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 SPIRE1Q08AE8 756 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 NFX1Q12986 1120 aaKnown RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 PPP2R5CQ13362 524 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 GPM6BQ13491 265 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 CALCRLQ16602 461 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 TCEAL5Q5H9L2 206 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 IER5Q5VY09 327 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 MCTP1Q6DN14 999 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 PTCRAQ6ISU1 281 aaPredicted RBP10.67□□□□□ -0.7
SF3B3-211ENST00000568291 ANO5Q75V66 913 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 RPAINQ86UA6 219 aa10.67□□□□□ -0.7
SF3B3-211ENST00000568291 TPH2Q8IWU9 490 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms