RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 KRT76Q01546 638 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 ODR4Q5SWX8 454 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 KANK3Q6NY19 840 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 SEPT1Q8WYJ6 367 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 TNPO1Q92973 898 aaKnown RBP15.88■□□□□ 0.13
SMG1-213ENST00000567737 SECISBP2LQ93073 1101 aaKnown RBP15.88■□□□□ 0.13
SMG1-213ENST00000567737 SMARCAD1Q9H4L7 1026 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 TBC1D17Q9HA65 648 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 TMEM161AQ9NX61 479 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 SPG21Q9NZD8 308 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 IGSF9Q9P2J2 1179 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 KDM3AQ9Y4C1 1321 aa15.88■□□□□ 0.13
SMG1-213ENST00000567737 DCDC2BA2VCK2 349 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 KRBA1A5PL33 1030 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 C9IYK1 514 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 NARSO43776 548 aaKnown RBP15.87■□□□□ 0.13
SMG1-213ENST00000567737 DCNP07585 359 aaKnown RBP15.87■□□□□ 0.13
SMG1-213ENST00000567737 INSRRP14616 1297 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 NONOQ15233 471 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMG1-213ENST00000567737 NLRX1Q86UT6 975 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 NME8Q8N427 588 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 PI4K2BQ8TCG2 481 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 BORCS6Q96GS4 357 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 TMEM117Q9H0C3 514 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 HELLSQ9NRZ9 838 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 RALYQ9UKM9 306 aaKnown RBP15.87■□□□□ 0.13
SMG1-213ENST00000567737 PCDHA2Q9Y5H9 948 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 ZMYM6O95789 1325 aa15.87■□□□□ 0.13
SMG1-213ENST00000567737 DOCK5Q9H7D0 1870 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 HOXA2O43364 376 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 RPS6KA5O75582 802 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 PPP1R37O75864 691 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 CXCL14O95715 111 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 PBX3P40426 434 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 TMC5Q6UXY8 1006 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 CABP7Q86V35 215 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 TBC1D10CQ8IV04 446 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 ABI1Q8IZP0 508 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 LRRC43Q8N309 656 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 PDCD7Q8N8D1 485 aaKnown RBP15.86■□□□□ 0.13
SMG1-213ENST00000567737 ELAC1Q9H777 363 aaKnown RBP15.86■□□□□ 0.13
SMG1-213ENST00000567737 CA14Q9ULX7 337 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 GINS2Q9Y248 185 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 SIT1Q9Y3P8 196 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 NEDD4P46934 1319 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 FRMPD4Q14CM0 1322 aa15.86■□□□□ 0.13
SMG1-213ENST00000567737 MAP1BP46821 2468 aaKnown RBP15.86■□□□□ 0.13
SMG1-213ENST00000567737 GSTTP1A0A1W2PQM5 241 aa15.85■□□□□ 0.13
SMG1-213ENST00000567737 EPCAMP16422 314 aa15.85■□□□□ 0.13
SMG1-213ENST00000567737 NT5C2P49902 561 aa15.85■□□□□ 0.13
SMG1-213ENST00000567737 LRRC55Q6ZSA7 311 aa15.85■□□□□ 0.13
SMG1-213ENST00000567737 HOMER1Q86YM7 354 aa15.85■□□□□ 0.13
SMG1-213ENST00000567737 MTMR8Q96EF0 704 aa15.85■□□□□ 0.13
SMG1-213ENST00000567737 CHD6Q8TD26 2715 aa15.85■□□□□ 0.13
SMG1-213ENST00000567737 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.84■□□□□ 0.13
SMG1-213ENST00000567737 SMIM35A0A1B0GVV1 85 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 KLRF2D3W0D1 207 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 GPR182O15218 404 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 SPTLC1O15269 473 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 ACAP1Q15027 740 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 PHLDB3Q6NSJ2 640 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 GPR149Q86SP6 731 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 SLC39A11Q8N1S5 342 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 STAG2Q8N3U4 1231 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 CASD1Q96PB1 797 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 ZSCAN10Q96SZ4 725 aaPredicted RBP15.84■□□□□ 0.13
SMG1-213ENST00000567737 SFXN1Q9H9B4 322 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 DLGAP2Q9P1A6 1054 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 USP18Q9UMW8 372 aa15.84■□□□□ 0.13
SMG1-213ENST00000567737 NOC2LQ9Y3T9 749 aaKnown RBP15.84■□□□□ 0.13
SMG1-213ENST00000567737 SPTBN2O15020 2390 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 SRFP11831 508 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 DMWDQ09019 674 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 GIT2Q14161 759 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 MCMDC2Q4G0Z9 681 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 PCNX4Q63HM2 1172 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 AZI2Q9H6S1 392 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 DCTPP1Q9H773 170 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 ST3GAL5Q9UNP4 418 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 FANCMQ8IYD8 2048 aa15.83■□□□□ 0.12
SMG1-213ENST00000567737 CHD8Q9HCK8 2581 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 DENND4AQ7Z401 1863 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 ATP9AO75110 1047 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 FAM189BP81408 668 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 LETM2Q2VYF4 491 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 PPFIBP1Q86W92 1011 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 ENAHQ8N8S7 591 aaPredicted RBP15.82■□□□□ 0.12
SMG1-213ENST00000567737 SLC22A17Q8WUG5 538 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 TRAPPC12Q8WVT3 735 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 TMEM169Q96HH4 297 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 CDHR1Q96JP9 859 aa15.82■□□□□ 0.12
SMG1-213ENST00000567737 POTEMA6NI47 508 aa15.81■□□□□ 0.12
SMG1-213ENST00000567737 SEC24BO95487 1268 aa15.81■□□□□ 0.12
SMG1-213ENST00000567737 KCNA2P16389 499 aa15.81■□□□□ 0.12
SMG1-213ENST00000567737 METAP2P50579 478 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMG1-213ENST00000567737 PLCB4Q15147 1175 aa15.81■□□□□ 0.12
SMG1-213ENST00000567737 ZNF528Q3MIS6 628 aa15.81■□□□□ 0.12
SMG1-213ENST00000567737 PPM1JQ5JR12 505 aa15.81■□□□□ 0.12
SMG1-213ENST00000567737 POTEGQ6S5H5 508 aa15.81■□□□□ 0.12
SMG1-213ENST00000567737 MTHFD1LQ6UB35 978 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms