RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 XBP1P17861 261 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 EIF4BP23588 611 aaKnown RBP17.12■□□□□ 0.33
CMTM3-212ENST00000566121 CTNNB1P35222 781 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 UBE3AQ05086 875 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 TMEM62Q0P6H9 643 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
CMTM3-212ENST00000566121 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 XKR3Q5GH77 459 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 LRCH2Q5VUJ6 765 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-212ENST00000566121 TMEM40Q8WWA1 233 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 CEP89Q96ST8 783 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 UPF3BQ9BZI7 483 aaKnown RBP17.12■□□□□ 0.33
CMTM3-212ENST00000566121 CDHR5Q9HBB8 845 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 TMEM161AQ9NX61 479 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 EVPLQ92817 2033 aa17.12■□□□□ 0.33
CMTM3-212ENST00000566121 GRXCR2A6NFK2 248 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 STBD1O95210 358 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 SCRN1Q12765 414 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 CAMK1Q14012 370 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 EFCAB12Q6NXP0 572 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 EXOC8Q8IYI6 725 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 MAP7D2Q96T17 732 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 TRAIPQ9BWF2 469 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 UNC45AQ9H3U1 944 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 KCNMB3Q9NPA1 279 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 PRKAG3Q9UGI9 489 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 FAM50BQ9Y247 325 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 SAMM50Q9Y512 469 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 PCDHB7Q9Y5E2 793 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 NLRC5Q86WI3 1866 aa17.11■□□□□ 0.33
CMTM3-212ENST00000566121 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
CMTM3-212ENST00000566121 GRM6O15303 877 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 DKC1O60832 514 aaKnown RBP eCLIP17.1■□□□□ 0.33
CMTM3-212ENST00000566121 PRKCEQ02156 737 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 NFX1Q12986 1120 aaKnown RBP17.1■□□□□ 0.33
CMTM3-212ENST00000566121 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 TCEAL5Q5H9L2 206 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 FAM228AQ86W67 206 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 FAM178BQ8IXR5 827 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 WASF1Q92558 559 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 PPP2R3CQ969Q6 453 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 ADAM2Q99965 735 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 SLKQ9H2G2 1235 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-212ENST00000566121 CHST12Q9NRB3 414 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 AAASQ9NRG9 546 aa17.1■□□□□ 0.33
CMTM3-212ENST00000566121 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-212ENST00000566121 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
CMTM3-212ENST00000566121 WDR81Q562E7 1941 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 FSD2A1L4K1 749 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 HOXA2O43364 376 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 MGEA5O60502 916 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 KIZQ2M2Z5 673 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 PDE12Q6L8Q7 609 aaKnown RBP17.09■□□□□ 0.33
CMTM3-212ENST00000566121 METTL13Q8N6R0 699 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-212ENST00000566121 LRFN2Q9ULH4 789 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 TPCN1Q9ULQ1 816 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
CMTM3-212ENST00000566121 CARNS1A5YM72 827 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 EOMESO95936 686 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 DARSP14868 501 aaKnown RBP17.08■□□□□ 0.32
CMTM3-212ENST00000566121 KCNA5P22460 613 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 LTBRP36941 435 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 GPC3P51654 580 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 NLRP11P59045 1033 aaKnown RBP17.08■□□□□ 0.32
CMTM3-212ENST00000566121 TBC1D8BQ0IIM8 1120 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 MIER3Q7Z3K6 550 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 OSMRQ99650 979 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 DDX25Q9UHL0 483 aaKnown RBP17.08■□□□□ 0.32
CMTM3-212ENST00000566121 LZTS1Q9Y250 596 aa17.08■□□□□ 0.32
CMTM3-212ENST00000566121 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 PI4K2BG5E9Z4 385 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 PPFIA3O75145 1194 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 MAFO75444 373 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-212ENST00000566121 TDP2O95551 362 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 VTNP04004 478 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 ITGB1P05556 798 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 PSMC5P62195 406 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 HYAL1Q12794 435 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 ADAM15Q13444 863 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 PTCRAQ6ISU1 281 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-212ENST00000566121 NEK8Q86SG6 692 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 ZNF410Q86VK4 478 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 INO80BQ9C086 356 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-212ENST00000566121 TMEM117Q9H0C3 514 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 ATP6V0A4Q9HBG4 840 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 AKT3Q9Y243 479 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 PCDHB12Q9Y5F1 795 aa17.07■□□□□ 0.32
CMTM3-212ENST00000566121 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
CMTM3-212ENST00000566121 C19orf67A6NJJ6 358 aa17.06■□□□□ 0.32
CMTM3-212ENST00000566121 RBAK-RBAKDNI3L0D1 243 aa17.06■□□□□ 0.32
CMTM3-212ENST00000566121 CTDNEP1O95476 244 aa17.06■□□□□ 0.32
CMTM3-212ENST00000566121 P4HBP07237 508 aaKnown RBP17.06■□□□□ 0.32
CMTM3-212ENST00000566121 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
CMTM3-212ENST00000566121 DNM2P50570 870 aa17.06■□□□□ 0.32
CMTM3-212ENST00000566121 CLCN3P51790 818 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms