RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 LSM14BQ9BX40 385 aaKnown RBP17.68■□□□□ 0.42
LINC00554-201ENST00000564841 ZFATQ9P243 1243 aa17.68■□□□□ 0.42
LINC00554-201ENST00000564841 DBR1Q9UK59 544 aaKnown RBP17.68■□□□□ 0.42
LINC00554-201ENST00000564841 CACNB3P54284 484 aa17.68■□□□□ 0.42
LINC00554-201ENST00000564841 ARL6IP4Q66PJ3 421 aaKnown RBP17.68■□□□□ 0.42
LINC00554-201ENST00000564841 CLEC10AQ8IUN9 316 aa17.68■□□□□ 0.42
LINC00554-201ENST00000564841 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
LINC00554-201ENST00000564841 TMX4Q9H1E5 349 aaPredicted RBP17.68■□□□□ 0.42
LINC00554-201ENST00000564841 EPB41L4BQ9H329 900 aa17.68■□□□□ 0.42
LINC00554-201ENST00000564841 LY75O60449 1722 aa17.68■□□□□ 0.42
LINC00554-201ENST00000564841 A6NHS1 94 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 CREB1P16220 341 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 PFKFB3Q16875 520 aaPredicted RBP17.67■□□□□ 0.42
LINC00554-201ENST00000564841 C12orf60Q5U649 245 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 GLG1Q92896 1179 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 UBA5Q9GZZ9 404 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 FGFR1OP2Q9NVK5 253 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 CYTH3O43739 400 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 SMIM24O75264 130 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 LDHCP07864 332 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 TECP42680 631 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 MKRN4PQ13434 485 aaPredicted RBP17.67■□□□□ 0.42
LINC00554-201ENST00000564841 SLC30A9Q6PML9 568 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 OTUD6AQ7L8S5 288 aa17.67■□□□□ 0.42
LINC00554-201ENST00000564841 RNF25Q96BH1 459 aaPredicted RBP17.67■□□□□ 0.42
LINC00554-201ENST00000564841 SSU72P8A0A1W2PR75 194 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 PYGLP06737 847 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 GSTO1P78417 241 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 CENPPQ6IPU0 288 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 CCDC84Q86UT8 332 aaPredicted RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 KSR1Q8IVT5 923 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 EPS8L3Q8TE67 593 aaKnown RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 RTFDC1Q9BY42 306 aaPredicted RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 SH3BP1Q9Y3L3 701 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 PCDHAC2Q9Y5I4 1007 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 GSTA1P08263 222 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 ALADP13716 330 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 SLC18A3Q16572 532 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 ZNF772Q68DY9 489 aaPredicted RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 USP17L2Q6R6M4 530 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 NAF1Q96HR8 494 aaKnown RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 PAPOLBQ9NRJ5 636 aaKnown RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 FLT1P17948 1338 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 SPDYE3A6NKU9 549 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 ASAP2O43150 1006 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 CCNT1O60563 726 aaKnown RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 ATP2A2P16615 1042 aaKnown RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 CCND1P24385 295 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 MSH2P43246 934 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 PLTPP55058 493 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 KLHL30Q0D2K2 578 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 GRIPAP1Q4V328 841 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 DAAM2Q86T65 1068 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 KIAA0825Q8IV33 1275 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 TBC1D7Q9P0N9 293 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 G3BP2Q9UN86 482 aaKnown RBP17.66■□□□□ 0.42
LINC00554-201ENST00000564841 ATP6V0A2Q9Y487 856 aa17.66■□□□□ 0.42
LINC00554-201ENST00000564841 RBAK-RBAKDNI3L0D1 243 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 SERPING1P05155 500 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 ACTN1P12814 892 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 TRAPPC10P48553 1259 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 PRPF4BQ13523 1007 aaKnown RBP17.65■□□□□ 0.42
LINC00554-201ENST00000564841 SLC29A2Q14542 456 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 TMEM260Q9NX78 707 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 BIN2Q9UBW5 565 aaPredicted RBP17.65■□□□□ 0.42
LINC00554-201ENST00000564841 ZBTB12Q9Y330 459 aaPredicted RBP17.65■□□□□ 0.42
LINC00554-201ENST00000564841 CFAP73A6NFT4 308 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 PGRMC1O00264 195 aaKnown RBP17.65■□□□□ 0.42
LINC00554-201ENST00000564841 PAPOLAP51003 745 aaKnown RBP17.65■□□□□ 0.42
LINC00554-201ENST00000564841 MTMR3Q13615 1198 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 ITIH4Q14624 930 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 ANO7Q6IWH7 933 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 CCHCR1Q8TD31 782 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 ATP8B4Q8TF62 1192 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 FMO2Q99518 471 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 SYT15Q9BQS2 421 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 PCDHA6Q9UN73 950 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 SNX24Q9Y343 169 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 PCDHA8Q9Y5H6 950 aa17.65■□□□□ 0.42
LINC00554-201ENST00000564841 SNX3O60493 162 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 CLSTN1O94985 981 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 MMP13P45452 471 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 TCP10Q12799 353 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 FITM2Q8N6M3 262 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 TSC22D3Q99576 134 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 CNOT10Q9H9A5 744 aaKnown RBP17.64■□□□□ 0.41
LINC00554-201ENST00000564841 HOMER3Q9NSC5 361 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 MYMKA6NI61 221 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 FAM196BA6NMK8 535 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 USP11P51784 963 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 ADCY1Q08828 1119 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 LRRC55Q6ZSA7 311 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.64■□□□□ 0.41
LINC00554-201ENST00000564841 UBR3Q6ZT12 1888 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 A0A1B0GUL6 1792 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 TCP11X1B4DZS4 312 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 H0Y3Z8 333 aa17.64■□□□□ 0.41
LINC00554-201ENST00000564841 DDAH1O94760 285 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms