RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 COL6A1P12109 1028 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 PI3P19957 117 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 NOLC1Q14978 699 aaKnown RBP eCLIP7.61□□□□□ -1.19
LINC00557-201ENST00000563184 TTF1Q15361 905 aaPredicted RBP7.61□□□□□ -1.19
LINC00557-201ENST00000563184 KIAA1841Q6NSI8 718 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 RAVER1Q8IY67 606 aaKnown RBP7.61□□□□□ -1.19
LINC00557-201ENST00000563184 CALML6Q8TD86 181 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 PPP1R16BQ96T49 567 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 OR10A5Q9H207 317 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 PRDM12Q9H4Q4 367 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 CD320Q9NPF0 282 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 CROTQ9UKG9 612 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 TMPRSS11EQ9UL52 423 aa7.61□□□□□ -1.19
LINC00557-201ENST00000563184 WASHC2AQ641Q2 1341 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 APOL3O95236 402 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 NEK2P51955 445 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 MLLT6P55198 1093 aaPredicted RBP7.6□□□□□ -1.19
LINC00557-201ENST00000563184 MCL1Q07820 350 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 ADCY2Q08462 1091 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 VWA3BQ502W6 1294 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 CT83Q5H943 113 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 C1orf162Q8NEQ5 155 aaPredicted RBP7.6□□□□□ -1.19
LINC00557-201ENST00000563184 TGFBRAP1Q8WUH2 860 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 ZCCHC14Q8WYQ9 949 aaKnown RBP7.6□□□□□ -1.19
LINC00557-201ENST00000563184 ACAP3Q96P50 834 aa7.6□□□□□ -1.19
LINC00557-201ENST00000563184 DBX1A6NMT0 343 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 MAFO75444 373 aaPredicted RBP7.59□□□□□ -1.19
LINC00557-201ENST00000563184 KNG1P01042 644 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 MYBL2P10244 700 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 ENPP1P22413 925 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 APEX1P27695 318 aaKnown RBP7.59□□□□□ -1.19
LINC00557-201ENST00000563184 FSCN1Q16658 493 aaKnown RBP7.59□□□□□ -1.19
LINC00557-201ENST00000563184 PITRM1Q5JRX3 1037 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 TIGD7Q6NT04 549 aaPredicted RBP7.59□□□□□ -1.19
LINC00557-201ENST00000563184 CNKSR3Q6P9H4 555 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 LYSMD2Q8IV50 215 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 FUBP3Q96I24 572 aaKnown RBP eCLIP7.59□□□□□ -1.19
LINC00557-201ENST00000563184 WRNIP1Q96S55 665 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 CCM2LQ9NUG4 571 aaPredicted RBP7.59□□□□□ -1.19
LINC00557-201ENST00000563184 G3BP2Q9UN86 482 aaKnown RBP7.59□□□□□ -1.19
LINC00557-201ENST00000563184 SMG5Q9UPR3 1016 aaKnown RBP7.59□□□□□ -1.19
LINC00557-201ENST00000563184 KCTD3Q9Y597 815 aa7.59□□□□□ -1.19
LINC00557-201ENST00000563184 TRIM75PA6NK02 468 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 PFKMP08237 780 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 RBP3P10745 1247 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 CD83Q01151 205 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 PCBP2Q15366 365 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC00557-201ENST00000563184 CCDC62Q6P9F0 684 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 SAPCD2Q86UD0 394 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 FERMT2Q96AC1 680 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 EAF2Q96CJ1 260 aaPredicted RBP7.58□□□□□ -1.2
LINC00557-201ENST00000563184 PWWP2AQ96N64 755 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 PITHD1Q9GZP4 211 aaPredicted RBP7.58□□□□□ -1.2
LINC00557-201ENST00000563184 METTL14Q9HCE5 456 aaKnown RBP7.58□□□□□ -1.2
LINC00557-201ENST00000563184 DENND2AQ9ULE3 1009 aa7.58□□□□□ -1.2
LINC00557-201ENST00000563184 CNOT6Q9ULM6 557 aaKnown RBP7.58□□□□□ -1.2
LINC00557-201ENST00000563184 SHTN1A0MZ66 631 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 TCAF2A6NFQ2 919 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 PCDHGA12O60330 932 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 TSPAN15O95858 294 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 ZNF28P17035 718 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 TRIM25Q14258 630 aaKnown RBP7.57□□□□□ -1.2
LINC00557-201ENST00000563184 PTPN21Q16825 1174 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 CXXC5Q7LFL8 322 aaKnown RBP7.57□□□□□ -1.2
LINC00557-201ENST00000563184 SLC41A1Q8IVJ1 513 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 ZNF526Q8TF50 670 aaPredicted RBP7.57□□□□□ -1.2
LINC00557-201ENST00000563184 JDP2Q8WYK2 163 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 CHMP4CQ96CF2 233 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 FAXDC2Q96IV6 333 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 MTG2Q9H4K7 406 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 SPEF1Q9Y4P9 236 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 PCDHGA9Q9Y5G4 932 aaKnown RBP7.57□□□□□ -1.2
LINC00557-201ENST00000563184 PCDHGA8Q9Y5G5 932 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 PCDHGA7Q9Y5G6 932 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 PCDHGA6Q9Y5G7 932 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 PCDHGA3Q9Y5H0 932 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 PCDHGA2Q9Y5H1 932 aa7.57□□□□□ -1.2
LINC00557-201ENST00000563184 MYPNQ86TC9 1320 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 A0A0A6YYJ9 748 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 CHGBP05060 677 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 LPLP06858 475 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 CELA3BP08861 270 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 RPL13P26373 211 aaKnown RBP7.56□□□□□ -1.2
LINC00557-201ENST00000563184 IL13P35225 146 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 BCAR1P56945 870 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 CAP1Q01518 475 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 NFATC3Q12968 1075 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 RGL3Q3MIN7 710 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 DPP8Q6V1X1 898 aaPredicted RBP7.56□□□□□ -1.2
LINC00557-201ENST00000563184 KCNK18Q7Z418 384 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 BCL6BQ8N143 479 aaPredicted RBP7.56□□□□□ -1.2
LINC00557-201ENST00000563184 DACT3Q96B18 629 aaPredicted RBP7.56□□□□□ -1.2
LINC00557-201ENST00000563184 SLC13A1Q9BZW2 595 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 WNT8AQ9H1J5 351 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 KCNG1Q9UIX4 513 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 EDARQ9UNE0 448 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 NUMBLQ9Y6R0 609 aa7.56□□□□□ -1.2
LINC00557-201ENST00000563184 FFAR3O14843 346 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 OPHN1O60890 802 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 PCDH8O95206 1070 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms