RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 SPATC1Q76KD6 591 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 SIN3AQ96ST3 1273 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 MEGF9Q9H1U4 602 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 JADE2Q9NQC1 790 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 KCND1Q9NSA2 647 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 ARHGAP20Q9P2F6 1191 aa6.52□□□□□ -1.37
SMG1-206ENST00000562668 XRN1Q8IZH2 1706 aaKnown RBP6.52□□□□□ -1.37
SMG1-206ENST00000562668 ADGRF5Q8IZF2 1346 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 PTPRUQ92729 1446 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 PDPK1O15530 556 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 ADCY3O60266 1144 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 ENO2P09104 434 aaPredicted RBP6.51□□□□□ -1.37
SMG1-206ENST00000562668 GLRBP48167 497 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 RASGRF1Q13972 1273 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 SLFN13Q68D06 897 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 Q6ZUG5 572 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 MAMDC2Q7Z304 686 aaPredicted RBP6.51□□□□□ -1.37
SMG1-206ENST00000562668 DNERQ8NFT8 737 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 KISS1RQ969F8 398 aaPredicted RBP6.51□□□□□ -1.37
SMG1-206ENST00000562668 CD244Q9BZW8 370 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 ZDHHC9Q9Y397 364 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 TRAF6Q9Y4K3 522 aa6.51□□□□□ -1.37
SMG1-206ENST00000562668 PRAG1Q86YV5 1406 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 ADGRB1O14514 1584 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 AQP7O14520 342 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 B4GALT4O60513 344 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 SUMO1P63165 101 aaKnown RBP6.5□□□□□ -1.37
SMG1-206ENST00000562668 PFKPQ01813 784 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 PAK1Q13153 545 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 MTERF2Q49AM1 385 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 MTDHQ86UE4 582 aaKnown RBP6.5□□□□□ -1.37
SMG1-206ENST00000562668 REXO1L1PQ8IX06 675 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 STPG3Q8N7X2 389 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMG1-206ENST00000562668 SH3RF2Q8TEC5 729 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 CD248Q9HCU0 757 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 SRPK3Q9UPE1 567 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 TSC22D4Q9Y3Q8 395 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 EID1Q9Y6B2 187 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 KIAA1210Q9ULL0 1709 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 LAMC1P11047 1609 aa6.5□□□□□ -1.37
SMG1-206ENST00000562668 ZNF335Q9H4Z2 1342 aaPredicted RBP6.5□□□□□ -1.37
SMG1-206ENST00000562668 METP08581 1390 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 ACOT7O00154 380 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 CNOT4O95628 575 aaKnown RBP6.49□□□□□ -1.37
SMG1-206ENST00000562668 CSF2RBP32927 897 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 ZXDAP98168 799 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 SSRP1Q08945 709 aaKnown RBP6.49□□□□□ -1.37
SMG1-206ENST00000562668 CDSNQ15517 529 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 NAALADL2Q58DX5 795 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 NBPF6Q5VWK0 638 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 SCUBE1Q8IWY4 988 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 AJUBAQ96IF1 538 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 NBPF4Q96M43 638 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 CDC6Q99741 560 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 KLC2Q9H0B6 622 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 TBX22Q9Y458 520 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 KNDC1Q76NI1 1749 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 TRPM1Q7Z4N2 1603 aa6.49□□□□□ -1.37
SMG1-206ENST00000562668 PIK3R4Q99570 1358 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 TRBV23-1A0A0A0MS06 115 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 TCRBV5S4A2TA0A5A2 114 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 H0Y858 1186 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 WNT9AO14904 365 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 SELENOPP49908 381 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 GPR155Q7Z3F1 870 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 IFNL2Q8IZJ0 200 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 PTPRN2Q92932 1015 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 CDK5RAP1Q96SZ6 601 aaKnown RBP6.48□□□□□ -1.37
SMG1-206ENST00000562668 PTPN18Q99952 460 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 TACO1Q9BSH4 297 aaKnown RBP6.48□□□□□ -1.37
SMG1-206ENST00000562668 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 PFDN2Q9UHV9 154 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 SLC4A7Q9Y6M7 1214 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 CPS1P31327 1500 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 LRRC7Q96NW7 1537 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 CLSPNQ9HAW4 1339 aa6.48□□□□□ -1.37
SMG1-206ENST00000562668 NKTRP30414 1462 aaKnown RBP6.47□□□□□ -1.37
SMG1-206ENST00000562668 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 PATE3B3GLJ2 98 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 E9PSI1 815 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 IL18BPO95998 194 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 C6orf222P0C671 652 aaPredicted RBP6.47□□□□□ -1.37
SMG1-206ENST00000562668 DBPQ10586 325 aaPredicted RBP6.47□□□□□ -1.37
SMG1-206ENST00000562668 GPR19Q15760 415 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 FIGNQ5HY92 759 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 NLGN4XQ8N0W4 816 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 ZBTB38Q8NAP3 1195 aaPredicted RBP6.47□□□□□ -1.37
SMG1-206ENST00000562668 C14orf93Q9H972 538 aaKnown RBP6.47□□□□□ -1.37
SMG1-206ENST00000562668 SEC61A2Q9H9S3 476 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 SLC39A2Q9NP94 309 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 TECPR2O15040 1411 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 IQSEC2Q5JU85 1478 aa6.47□□□□□ -1.37
SMG1-206ENST00000562668 ARVCFO00192 962 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 DIAPH1O60610 1272 aaKnown RBP6.46□□□□□ -1.38
SMG1-206ENST00000562668 KCNA6P17658 529 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 PTPN1P18031 435 aaKnown RBP6.46□□□□□ -1.38
SMG1-206ENST00000562668 NAT1P18440 290 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 FAM209AQ5JX71 171 aa6.46□□□□□ -1.38
SMG1-206ENST00000562668 FOXB2Q5VYV0 432 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms