RNA–Protein interactions for RNA: ENST00000562226.5

LMF1-204, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 1,088 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-204ENST00000562226 ZNF862O60290 1169 aa23.21■■□□□ 1.31
LMF1-204ENST00000562226 CLCN3P51790 818 aa23.21■■□□□ 1.31
LMF1-204ENST00000562226 INF2Q27J81 1249 aa23.21■■□□□ 1.31
LMF1-204ENST00000562226 TMEM40Q8WWA1 233 aa23.21■■□□□ 1.31
LMF1-204ENST00000562226 NECAB3Q96P71 396 aaPredicted RBP23.21■■□□□ 1.31
LMF1-204ENST00000562226 ADAM2Q99965 735 aa23.21■■□□□ 1.31
LMF1-204ENST00000562226 PHF20Q9BVI0 1012 aa23.21■■□□□ 1.31
LMF1-204ENST00000562226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.2■■□□□ 1.3
LMF1-204ENST00000562226 KCNA5P22460 613 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 AK2P54819 239 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 NPY5RQ15761 445 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 LETM2Q2VYF4 491 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 CRIPAKQ8N1N5 446 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 GJA10Q969M2 543 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 MBOAT7Q96N66 472 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 RGS18Q9NS28 235 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 MRPL42Q9Y6G3 142 aaKnown RBP23.2■■□□□ 1.3
LMF1-204ENST00000562226 XIRP2A4UGR9 3374 aa23.2■■□□□ 1.3
LMF1-204ENST00000562226 GPR32O75388 356 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 LINC00271P0C7V0 271 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 NLRP11P59045 1033 aaKnown RBP23.19■■□□□ 1.3
LMF1-204ENST00000562226 TBC1D8BQ0IIM8 1120 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 UGCGQ16739 394 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 PAN2Q504Q3 1202 aaKnown RBP23.19■■□□□ 1.3
LMF1-204ENST00000562226 NAALADL2Q58DX5 795 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 TCEAL5Q5H9L2 206 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 SLC24A5Q71RS6 500 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 FAM228AQ86W67 206 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 LRRC71Q8N4P6 559 aa23.19■■□□□ 1.3
LMF1-204ENST00000562226 NAP1L4Q99733 375 aaKnown RBP23.19■■□□□ 1.3
LMF1-204ENST00000562226 GRM6O15303 877 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 NCK2O43639 380 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 MGEA5O60502 916 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 GCFC2P16383 781 aaKnown RBP23.18■■□□□ 1.3
LMF1-204ENST00000562226 LEXMQ3ZCV2 418 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 XKR3Q5GH77 459 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 NEK8Q86SG6 692 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 ETNPPLQ8TBG4 499 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 P2RX5Q93086 422 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 SCLT1Q96NL6 688 aa23.18■■□□□ 1.3
LMF1-204ENST00000562226 ORC3Q9UBD5 711 aaPredicted RBP23.18■■□□□ 1.3
LMF1-204ENST00000562226 SEPT9Q9UHD8 586 aaPredicted RBP23.18■■□□□ 1.3
LMF1-204ENST00000562226 EP400NLQ6ZTU2 488 aa23.17■■□□□ 1.3
LMF1-204ENST00000562226 LINC01465Q8N7H1 131 aa23.17■■□□□ 1.3
LMF1-204ENST00000562226 PABPC5Q96DU9 382 aaKnown RBP23.17■■□□□ 1.3
LMF1-204ENST00000562226 BRMS1Q9HCU9 246 aa23.17■■□□□ 1.3
LMF1-204ENST00000562226 WDR81Q562E7 1941 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 C9IYK1 514 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 MARCH6O60337 910 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 MMP1P03956 469 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 ZSCAN20P17040 1043 aaPredicted RBP23.16■■□□□ 1.3
LMF1-204ENST00000562226 EIF4BP23588 611 aaKnown RBP23.16■■□□□ 1.3
LMF1-204ENST00000562226 PUS10Q3MIT2 529 aaKnown RBP23.16■■□□□ 1.3
LMF1-204ENST00000562226 MTERF2Q49AM1 385 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 SPOUT1Q5T280 376 aaKnown RBP23.16■■□□□ 1.3
LMF1-204ENST00000562226 B3GNT9Q6UX72 402 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 FAM20AQ96MK3 541 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 NIFKQ9BYG3 293 aaKnown RBP23.16■■□□□ 1.3
LMF1-204ENST00000562226 ATP6V0A4Q9HBG4 840 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 AAASQ9NRG9 546 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 PLAGL2Q9UPG8 496 aa23.16■■□□□ 1.3
LMF1-204ENST00000562226 SLC37A4O43826 429 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 DKC1O60832 514 aaKnown RBP eCLIP23.15■■□□□ 1.3
LMF1-204ENST00000562226 GATMP50440 423 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 DNM2P50570 870 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 CDC42EP1Q00587 391 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 PPP4R3AQ6IN85 833 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 PIK3AP1Q6ZUJ8 805 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 PPP2R3CQ969Q6 453 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 ADAMTS10Q9H324 1103 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 ELAC1Q9H777 363 aaKnown RBP23.15■■□□□ 1.3
LMF1-204ENST00000562226 ALG13Q9NP73 1137 aaKnown RBP23.15■■□□□ 1.3
LMF1-204ENST00000562226 TMEM161AQ9NX61 479 aa23.15■■□□□ 1.3
LMF1-204ENST00000562226 NCOR1O75376 2440 aa23.14■■□□□ 1.3
LMF1-204ENST00000562226 TBKBP1A7MCY6 615 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 CCNT1O60563 726 aaKnown RBP23.14■■□□□ 1.29
LMF1-204ENST00000562226 CTDNEP1O95476 244 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 GPC3P51654 580 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 PSMC5P62195 406 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 TARBP2Q15633 366 aaKnown RBP23.14■■□□□ 1.29
LMF1-204ENST00000562226 NLRP7Q8WX94 980 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 JPH2Q9BR39 696 aaPredicted RBP23.14■■□□□ 1.29
LMF1-204ENST00000562226 CLDND1Q9NY35 253 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 PCDHB12Q9Y5F1 795 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 MUC3AQ02505 3323 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 BRWD1Q9NSI6 2320 aa23.14■■□□□ 1.29
LMF1-204ENST00000562226 DDX11L8A8MPP1 907 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 TBX3O15119 743 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 HOXA2O43364 376 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 CSPG5O95196 566 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 KRT2P35908 639 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 NEK4P51957 841 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 PPP2R5CQ13362 524 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 DSC3Q14574 896 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 PTCRAQ6ISU1 281 aaPredicted RBP23.13■■□□□ 1.29
LMF1-204ENST00000562226 NECAB1Q8N987 351 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 KLHL23Q8NBE8 558 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.13■■□□□ 1.29
LMF1-204ENST00000562226 NEK9Q8TD19 979 aa23.13■■□□□ 1.29
LMF1-204ENST00000562226 GTF3C6Q969F1 213 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms