RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 DGKIO75912 1065 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 LINC00271P0C7V0 271 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 FOSBP53539 338 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 KIZQ2M2Z5 673 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 ODR4Q5SWX8 454 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 C4orf19Q8IY42 314 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 LRRC71Q8N4P6 559 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 YME1L1Q96TA2 773 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 ST3GAL5Q9UNP4 418 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 MYO9BQ13459 2157 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 TTC3P53804 2025 aa23.2■■□□□ 1.3
TPM1-232ENST00000561425 TMEM150BA6NC51 233 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 GPR182O15218 404 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 ST18O60284 1047 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 DKC1O60832 514 aaKnown RBP eCLIP23.19■■□□□ 1.3
TPM1-232ENST00000561425 NLRP11P59045 1033 aaKnown RBP23.19■■□□□ 1.3
TPM1-232ENST00000561425 GUCY1B3Q02153 619 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 TBC1D8BQ0IIM8 1120 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 SAFBQ15424 915 aaKnown RBP eCLIP23.19■■□□□ 1.3
TPM1-232ENST00000561425 TMEM266Q2M3C6 531 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 FAM228AQ86W67 206 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 SAMD11Q96NU1 681 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 MAP7D2Q96T17 732 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 OSMRQ99650 979 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 HSD17B14Q9BPX1 270 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 UPF2Q9HAU5 1272 aaKnown RBP23.19■■□□□ 1.3
TPM1-232ENST00000561425 SEPT9Q9UHD8 586 aaPredicted RBP23.19■■□□□ 1.3
TPM1-232ENST00000561425 PCDHA12Q9UN75 941 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 PPME1Q9Y570 386 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 EYSQ5T1H1 3165 aa23.19■■□□□ 1.3
TPM1-232ENST00000561425 DDX11L8A8MPP1 907 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 MGEA5O60502 916 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 SLITRK3O94933 977 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 CD2BP2O95400 341 aaKnown RBP23.18■■□□□ 1.3
TPM1-232ENST00000561425 GPC3P51654 580 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 FAM189BP81408 668 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 CDC42EP1Q00587 391 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 DSC3Q14574 896 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 MTERF2Q49AM1 385 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 C17orf80Q9BSJ5 609 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 RGS18Q9NS28 235 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 GINS2Q9Y248 185 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 EVPLQ92817 2033 aa23.18■■□□□ 1.3
TPM1-232ENST00000561425 MARCH6O60337 910 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 NEMFO60524 1076 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 LYPLA2O95372 231 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 EIF4BP23588 611 aaKnown RBP23.17■■□□□ 1.3
TPM1-232ENST00000561425 NFX1Q12986 1120 aaKnown RBP23.17■■□□□ 1.3
TPM1-232ENST00000561425 ORC2Q13416 577 aaPredicted RBP23.17■■□□□ 1.3
TPM1-232ENST00000561425 DRP2Q13474 957 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 CALCRLQ16602 461 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 NPAS4Q8IUM7 802 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 TMEM60Q9H2L4 133 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 TTC12Q9H892 705 aaPredicted RBP23.17■■□□□ 1.3
TPM1-232ENST00000561425 CYP26B1Q9NR63 512 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 RGL1Q9NZL6 768 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 AKT3Q9Y243 479 aa23.17■■□□□ 1.3
TPM1-232ENST00000561425 U2AF2P26368 475 aaKnown RBP eCLIP23.16■■□□□ 1.3
TPM1-232ENST00000561425 EPC2Q52LR7 807 aa23.16■■□□□ 1.3
TPM1-232ENST00000561425 ZNF579Q8NAF0 562 aaKnown RBP23.16■■□□□ 1.3
TPM1-232ENST00000561425 FAM184AQ8NB25 1140 aa23.16■■□□□ 1.3
TPM1-232ENST00000561425 CLP1Q92989 425 aaKnown RBP23.16■■□□□ 1.3
TPM1-232ENST00000561425 DYDC2Q96IM9 177 aa23.16■■□□□ 1.3
TPM1-232ENST00000561425 TMX3Q96JJ7 454 aa23.16■■□□□ 1.3
TPM1-232ENST00000561425 LXNQ9BS40 222 aa23.16■■□□□ 1.3
TPM1-232ENST00000561425 DHX33Q9H6R0 707 aaKnown RBP23.16■■□□□ 1.3
TPM1-232ENST00000561425 ZSWIM4Q9H7M6 989 aa23.16■■□□□ 1.3
TPM1-232ENST00000561425 C1orf112Q9NSG2 853 aa23.16■■□□□ 1.3
TPM1-232ENST00000561425 C9IYK1 514 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 C5orf67F2Z3F1 127 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 GTPBP6O43824 516 aaPredicted RBP23.15■■□□□ 1.3
TPM1-232ENST00000561425 DARSP14868 501 aaKnown RBP23.15■■□□□ 1.3
TPM1-232ENST00000561425 SARSP49591 514 aaKnown RBP23.15■■□□□ 1.3
TPM1-232ENST00000561425 MCM2P49736 904 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 NCAPH2Q6IBW4 605 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 NOSTRINQ8IVI9 506 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 TMEM192Q8IY95 271 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 PPP1R16BQ96T49 567 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 ADAM2Q99965 735 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 SH2D3AQ9BRG2 576 aa23.15■■□□□ 1.3
TPM1-232ENST00000561425 ADGRA3Q8IWK6 1321 aa23.14■■□□□ 1.3
TPM1-232ENST00000561425 H3BNC9 293 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 STAG3L1P0CL83 205 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 YWHABP31946 246 aaKnown RBP23.14■■□□□ 1.29
TPM1-232ENST00000561425 TRAPPC10P48553 1259 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 NPEPPSP55786 919 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 CCDC85BQ15834 202 aaPredicted RBP23.14■■□□□ 1.29
TPM1-232ENST00000561425 PLA2G4FQ68DD2 849 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 SLC24A5Q71RS6 500 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 FIBCD1Q8N539 461 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 NEK9Q8TD19 979 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 EIF2AK1Q9BQI3 630 aaKnown RBP23.14■■□□□ 1.29
TPM1-232ENST00000561425 JPH2Q9BR39 696 aaPredicted RBP23.14■■□□□ 1.29
TPM1-232ENST00000561425 PRDM6Q9NQX0 595 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 MTUS1Q9ULD2 1270 aa23.14■■□□□ 1.29
TPM1-232ENST00000561425 RB1P06400 928 aa23.13■■□□□ 1.29
TPM1-232ENST00000561425 TXKP42681 527 aa23.13■■□□□ 1.29
TPM1-232ENST00000561425 DNM2P50570 870 aa23.13■■□□□ 1.29
TPM1-232ENST00000561425 CTTNQ14247 550 aaKnown RBP23.13■■□□□ 1.29
TPM1-232ENST00000561425 OTUD6AQ7L8S5 288 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms