RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 ZNF318Q5VUA4 2279 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 DDX39AO00148 427 aaKnown RBP8.28□□□□□ -1.08
GABPB1-211ENST00000561010 EFCAB14O75071 495 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 PPFIA3O75145 1194 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 STAM2O75886 525 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 ARP10275 920 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 KCNA5P22460 613 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 CDC27P30260 824 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 MGAT3Q09327 533 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 PPFIA1Q13136 1202 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 MTMR1Q13613 665 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 LPIN1Q14693 890 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 GRIK4Q16099 956 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 MARCH8Q5T0T0 291 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 APOA5Q6Q788 366 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 EP400NLQ6ZTU2 488 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 NLRX1Q86UT6 975 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 FANCBQ8NB91 859 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 EHBP1Q8NDI1 1231 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 GLG1Q92896 1179 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 GPRASP2Q96D09 838 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 MAP3K14Q99558 947 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 IFIH1Q9BYX4 1025 aaKnown RBP8.28□□□□□ -1.08
GABPB1-211ENST00000561010 UBE2ZQ9H832 354 aaPredicted RBP8.28□□□□□ -1.08
GABPB1-211ENST00000561010 ZNF215Q9UL58 517 aaPredicted RBP8.28□□□□□ -1.08
GABPB1-211ENST00000561010 NAP1L2Q9ULW6 460 aaPredicted RBP8.28□□□□□ -1.08
GABPB1-211ENST00000561010 CDY2AQ9Y6F7 541 aa8.28□□□□□ -1.08
GABPB1-211ENST00000561010 TECTAO75443 2155 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 SPDYE3A6NKU9 549 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 H3BQ06 376 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-211ENST00000561010 GNAT1P11488 350 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 INSRRP14616 1297 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 IL9P15248 144 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 SMARCA1P28370 1054 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 LIFRP42702 1097 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 GNAQP50148 359 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 GATMP50440 423 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 NAPAP54920 295 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 GPM6BQ13491 265 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 AAK1Q2M2I8 961 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 TCEAL5Q5H9L2 206 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 FAM26DQ5JW98 314 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-211ENST00000561010 ADAM32Q8TC27 787 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 LINC01599Q8WXQ3 324 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 SEPT1Q8WYJ6 367 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 ZNF592Q92610 1267 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 TOP1MTQ969P6 601 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 PPP1R16BQ96T49 567 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 SENP7Q9BQF6 1050 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 LZTS2Q9BRK4 669 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 AGO3Q9H9G7 860 aaKnown RBP8.27□□□□□ -1.09
GABPB1-211ENST00000561010 JADE2Q9NQC1 790 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 TUBE1Q9UJT0 475 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 COG5Q9UP83 839 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 TRIP11Q15643 1979 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 TDRD15B5MCY1 1934 aaKnown RBP8.27□□□□□ -1.09
GABPB1-211ENST00000561010 NRCAMQ92823 1304 aa8.27□□□□□ -1.09
GABPB1-211ENST00000561010 C2orf16Q68DN1 1984 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 DOCK6Q96HP0 2047 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 KLF18A0A0U1RQI7 1052 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 GOLGA8AA7E2F4 631 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 GOLGA8BA8MQT2 603 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 STXBP3O00186 592 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 GRM6O15303 877 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 LINC00271P0C7V0 271 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 CALM1P0DP23 149 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 CALM2P0DP24 149 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 CALM3P0DP25 149 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 VARSP26640 1264 aaKnown RBP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 CD52P31358 61 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 CTNNB1P35222 781 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 GTF2F1P35269 517 aaKnown RBP eCLIP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 ACTR2P61160 394 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 EXOSC10Q01780 885 aaKnown RBP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 APOBRQ0VD83 1088 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 ITGB3BPQ13352 177 aaPredicted RBP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 CLUL1Q15846 466 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 RTN1Q16799 776 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 TMEM266Q2M3C6 531 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 PAN2Q504Q3 1202 aaKnown RBP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 FBXO47Q5MNV8 452 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 JAKMIP3Q5VZ66 844 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 XRRA1Q6P2D8 792 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 TRMT1LQ7Z2T5 733 aaKnown RBP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 RTN4RL1Q86UN2 441 aaPredicted RBP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 SGMS1Q86VZ5 419 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 TMTC2Q8N394 836 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 MRPL38Q96DV4 380 aaKnown RBP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 NEK1Q96PY6 1258 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 OCSTAMPQ9BR26 566 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 MXRA8Q9BRK3 442 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 ANO3Q9BYT9 981 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 EHMT1Q9H9B1 1298 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 JPH1Q9HDC5 661 aaPredicted RBP8.26□□□□□ -1.09
GABPB1-211ENST00000561010 KCNH7Q9NS40 1196 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 ERAP1Q9NZ08 941 aa8.26□□□□□ -1.09
GABPB1-211ENST00000561010 SLC9A2Q9UBY0 812 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms