RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 KDM3AQ9Y4C1 1321 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 ADGRA3Q8IWK6 1321 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 H3BNC9 293 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 UPP2O95045 317 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 OATP04181 439 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 UGCGQ16739 394 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 PTPROQ16827 1216 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 FTHL17Q9BXU8 183 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 FAM49AQ9H0Q0 323 aaPredicted RBP17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 RC3H2Q9HBD1 1191 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 NRBP2Q9NSY0 501 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 RWDD3Q9Y3V2 267 aa17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 MYH9P35579 1960 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-210ENST00000560383 RBAK-RBAKDNI3L0D1 243 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 M0QZ92 97 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 EML1O00423 815 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 MAGEB2O15479 319 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 STBD1O95210 358 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 CD2BP2O95400 341 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 MCM2P49736 904 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 PRKCEQ02156 737 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 SPIRE1Q08AE8 756 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 TIGD5Q53EQ6 642 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 TMEM192Q8IY95 271 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 LINC01465Q8N7H1 131 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 FOXP1Q9H334 677 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 TRPV2Q9Y5S1 764 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 ATG2AQ2TAZ0 1938 aa17.07■□□□□ 0.32
SNRPA1-210ENST00000560383 WDR81Q562E7 1941 aa17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 C5orf67F2Z3F1 127 aa17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 FOSBP53539 338 aa17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 TARBP2Q15633 366 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 SLFN12Q8IYM2 578 aa17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 FIBCD1Q8N539 461 aa17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 TMX3Q96JJ7 454 aa17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 CEP89Q96ST8 783 aa17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 BACH2Q9BYV9 841 aa17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 CELF4Q9BZC1 486 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 UBE2ZQ9H832 354 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 AGO3Q9H9G7 860 aaKnown RBP17.06■□□□□ 0.32
SNRPA1-210ENST00000560383 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 WNT7AO00755 349 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 ENPP3O14638 875 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 RB1P06400 928 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 LINC00271P0C7V0 271 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 PSMC5P62195 406 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 GPM6BQ13491 265 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 XKR3Q5GH77 459 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 FAM184AQ8NB25 1140 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 ZNF689Q96CS4 500 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 MTMR9Q96QG7 549 aa17.05■□□□□ 0.32
SNRPA1-210ENST00000560383 BAG4O95429 457 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 P4HBP07237 508 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 CD52P31358 61 aa17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 TMEM62Q0P6H9 643 aa17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 EPHA7Q15375 998 aa17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 TRMT1LQ7Z2T5 733 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 CRIPAKQ8N1N5 446 aa17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 LINC01599Q8WXQ3 324 aa17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 NECAB3Q96P71 396 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 C11orf84Q9BUA3 381 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 KIAA1671Q9BY89 1806 aa17.04■□□□□ 0.32
SNRPA1-210ENST00000560383 IGKV6-21A0A0C4DH24 114 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 NEMFO60524 1076 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 DGKIO75912 1065 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■□□□□ 8.1
SNRPA1-210ENST00000560383 CTNNB1P35222 781 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 QARSP47897 775 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 PAK2Q13177 524 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 ORC2Q13416 577 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 COL19A1Q14993 1142 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 LEXMQ3ZCV2 418 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 NPAS4Q8IUM7 802 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 NOSTRINQ8IVI9 506 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 BANK1Q8NDB2 785 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 LMAN2LQ9H0V9 348 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 PADI3Q9ULW8 664 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 EVPLQ92817 2033 aa17.03■□□□□ 0.32
SNRPA1-210ENST00000560383 MARCH6O60337 910 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 DKC1O60832 514 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 GPR32O75388 356 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 TMOD1P28289 359 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 BMPR1AP36894 532 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 CALCRLQ16602 461 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 EFCAB12Q6NXP0 572 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 ANO5Q75V66 913 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 C4orf19Q8IY42 314 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 CMTR2Q8IYT2 770 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 METTL13Q8N6R0 699 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 PLVAPQ9BX97 442 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 NSUN3Q9H649 340 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 CDHR5Q9HBB8 845 aa17.02■□□□□ 0.32
SNRPA1-210ENST00000560383 PCDHA12Q9UN75 941 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 650.5 ms