RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	PDS5A	Q29RF7	1337 aa	Known RBP	10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	LRRD1	A4D1F6	860 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	GMNN	O75496	209 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	EYA4	O95677	639 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	PHKA2	P46019	1235 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	GFPT1	Q06210	699 aa	Predicted RBP	10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	COG2	Q14746	738 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	SLC10A5	Q5PT55	438 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	ANKRD40	Q6AI12	368 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	MCUR1	Q96AQ8	359 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	RILP	Q96NA2	401 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	TRIM9	Q9C026	710 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	POLR3F	Q9H1D9	316 aa	Predicted RBP	10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	ATP8A1	Q9Y2Q0	1164 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	NPHP3-ACAD11	A0A0J9YXS1	232 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	POC1B-GALNT4	F8VUJ3	575 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	WDR46	O15213	610 aa	Known RBP	10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	ZNF568	Q3ZCX4	644 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	RHPN2	Q8IUC4	686 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	CCNY	Q8ND76	341 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	LPAR1	Q92633	364 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	PRR12	Q9ULL5	1215 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	MAP2	P11137	1827 aa	Known RBP	10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	PXDN	Q92626	1479 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	TTC26	A0AVF1	554 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	MCF2L	O15068	1137 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	HIP1R	O75146	1068 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	PALM	O75781	387 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	GYS1	P13807	737 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	PPFIBP2	Q8ND30	876 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	RASSF4	Q9H2L5	321 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	ANAPC5	Q9UJX4	755 aa		10.07	□□□□□ -0.8
NEO1-208	ENST00000560328	CNTNAP5	Q8WYK1	1306 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	PRPSAP2	O60256	369 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	TROVE2	P10155	538 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	PPP4C	P60510	307 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	GPATCH11	Q8N954	259 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	OR6B3	Q8NGW1	331 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	HPS3	Q969F9	1004 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SPATA33	Q96N06	139 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	TUFT1	Q9NNX1	390 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SH3BP5	O60239	455 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	MYC	P01106	439 aa	Predicted RBP	10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	DPEP1	P16444	411 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ARL4A	P40617	200 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SIX6OS1	Q8N1H7	587 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	GSDMB	Q8TAX9	411 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ELP3	Q9H9T3	547 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SLC9A2	Q9UBY0	812 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SLC7A5	Q01650	507 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ARMCX2	Q7L311	632 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	RPUSD2	Q8IZ73	545 aa	Known RBP	10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ARHGEF2	Q92974	986 aa	Known RBP	10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SAAL1	Q96ER3	474 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	MAP3K14	Q99558	947 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	JMJD4	Q9H9V9	463 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ATP8B1	O43520	1251 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ARPP19	P56211	112 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	RWDD2B	P57060	319 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	TNFAIP2	Q03169	654 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	PRPSAP1	Q14558	356 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SLC15A2	Q16348	729 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	CYFIP1	Q7L576	1253 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	PNMA8A	Q86V59	439 aa	Predicted RBP	10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ZNF668	Q96K58	619 aa	Predicted RBP	10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	VCPKMT	Q9H867	229 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SPON1	Q9HCB6	807 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	ADAM22	Q9P0K1	906 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	POLL	Q9UGP5	575 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SCAF8	Q9UPN6	1271 aa	Known RBP	10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	SCIN	Q9Y6U3	715 aa		10.06	□□□□□ -0.8
NEO1-208	ENST00000560328	YWHAB	P31946	246 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	TRIP13	Q15645	432 aa	Predicted RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	DARS2	Q6PI48	645 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	DSTYK	Q6XUX3	929 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	FASTKD5	Q7L8L6	764 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	ZNF280C	Q8ND82	737 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	TMEM39B	Q9GZU3	492 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	PFDN4	Q9NQP4	134 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	GNAT1	P11488	350 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	SAT1	P21673	171 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	DR1	Q01658	176 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	DHX9	Q08211	1270 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	DPYD	Q12882	1025 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	BAAT	Q14032	418 aa	Predicted RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	ZSCAN26	Q16670	478 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	ANGEL2	Q5VTE6	544 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	TMEM270	Q6UE05	265 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	USP49	Q70CQ1	688 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	HAUS6	Q7Z4H7	955 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	CDKL2	Q92772	493 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	INTS2	Q9H0H0	1204 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	KIF20B	Q96Q89	1820 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	CCDC151	A5D8V7	595 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	FGG	P02679	453 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	FGFR2	P21802	821 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	NMT1	P30419	496 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	GPC3	P51654	580 aa		10.05	□□□□□ -0.8

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