RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	PLPPR4	Q7Z2D5	763 aa		11.33	□□□□□ -0.6
FAM227B-208	ENST00000559573	INTS4	Q96HW7	963 aa	Known RBP	11.33	□□□□□ -0.6
FAM227B-208	ENST00000559573	FAM20A	Q96MK3	541 aa		11.33	□□□□□ -0.6
FAM227B-208	ENST00000559573	PRO3102	Q9H379	93 aa		11.33	□□□□□ -0.6
FAM227B-208	ENST00000559573	AGO3	Q9H9G7	860 aa	Known RBP	11.33	□□□□□ -0.6
FAM227B-208	ENST00000559573	NRCAM	Q92823	1304 aa		11.33	□□□□□ -0.6
FAM227B-208	ENST00000559573	UQCRHL	A0A096LP55	91 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	BAG4	O95429	457 aa	Known RBP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	UQCRH	P07919	91 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	HOXC8	P31273	242 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	CACNB1	Q02641	598 aa	Predicted RBP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	TMEM240	Q5SV17	173 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	FAM160B1	Q5W0V3	765 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	KIAA0319L	Q8IZA0	1049 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	AFAP1L1	Q8TED9	768 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	EPSTI1	Q96J88	318 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	OSMR	Q99650	979 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	NOL7	Q9UMY1	257 aa	Known RBP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	RSPH10B2	B2RC85	870 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573		E9PMD0	336 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	C22orf31	O95567	290 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	RSPH10B	P0C881	870 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	YWHAB	P31946	246 aa	Known RBP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	QARS	P47897	775 aa	Known RBP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	DEFB103A	P81534	67 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	DNM1	Q05193	864 aa	Known RBP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	SESTD1	Q86VW0	696 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	DBF4B	Q8NFT6	615 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	CEP170P1	Q96L14	293 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	HSD17B14	Q9BPX1	270 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	MMTAG2	Q9BU76	263 aa	Known RBP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	CCDC94	Q9BW85	323 aa	Predicted RBP	11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	AKT3	Q9Y243	479 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	KIF3A	Q9Y496	699 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	CDY2A	Q9Y6F7	541 aa		11.32	□□□□□ -0.6
FAM227B-208	ENST00000559573	TRIO	O75962	3097 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	UPP2	O95045	317 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	CSPG5	O95196	566 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	JAK3	P52333	1124 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	XKR9	Q5GH70	373 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	HABP4	Q5JVS0	413 aa	Known RBP	11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	SLFN12	Q8IYM2	578 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	TNPO1	Q92973	898 aa	Known RBP	11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	RNPC3	Q96LT9	517 aa	Known RBP	11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	CEP89	Q96ST8	783 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	CERS4	Q9HA82	394 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	LRWD1	Q9UFC0	647 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	KIAA1024	Q9UPX6	916 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	HBP1	O60381	514 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	USO1	O60763	962 aa	Known RBP	11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	ARHGEF15	O94989	841 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	SELP	P16109	830 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	CD52	P31358	61 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	NLRP11	P59045	1033 aa	Known RBP	11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	PSMC5	P62195	406 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	NFX1	Q12986	1120 aa	Known RBP	11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	PTK7	Q13308	1070 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	TDH	Q8IZJ6	230 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	TMEM199	Q8N511	208 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	RETREG2	Q8NC44	543 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	RNF19A	Q9NV58	838 aa		11.31	□□□□□ -0.6
FAM227B-208	ENST00000559573	SFI1	A8K8P3	1242 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	P4HB	P07237	508 aa	Known RBP	11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	SRGAP2C	P0DJJ0	459 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	SFN	P31947	248 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	CCT6A	P40227	531 aa	Known RBP	11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	TBC1D8B	Q0IIM8	1120 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	EPHA7	Q15375	998 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	RILPL1	Q5EBL4	403 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	CDR2L	Q86X02	465 aa	Predicted RBP	11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	RHPN2	Q8IUC4	686 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	SNX29	Q8TEQ0	813 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	BBX	Q8WY36	941 aa	Predicted RBP	11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	GBF1	Q92538	1859 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	NLRP4	Q96MN2	994 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	GTPBP4	Q9BZE4	634 aa	Known RBP	11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	CSRNP2	Q9H175	543 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	CYP26B1	Q9NR63	512 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	DDX19A	Q9NUU7	478 aa	Known RBP	11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	PTPRS	Q13332	1948 aa		11.3	□□□□□ -0.6
FAM227B-208	ENST00000559573	TBX3	O15119	743 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	SSB	P05455	408 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	ZSCAN22	P10073	491 aa	Predicted RBP	11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	ATP2C1	P98194	919 aa	Predicted RBP	11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	KARS	Q15046	597 aa	Known RBP	11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	PTPA	Q15257	358 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	DTHD1	Q6ZMT9	781 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	FAM177A1	Q8N128	213 aa	Predicted RBP	11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	STAM	Q92783	540 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	KIFC3	Q9BVG8	833 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	KIF20A	O95235	890 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	F13A1	P00488	732 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	ZSCAN20	P17040	1043 aa	Predicted RBP	11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	PDC	P20941	246 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	LPIN1	Q14693	890 aa		11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	TARBP2	Q15633	366 aa	Known RBP	11.29	□□□□□ -0.6
FAM227B-208	ENST00000559573	SASS6	Q6UVJ0	657 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms