RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 CPLX2Q6PUV4 134 aaKnown RBP16.87■□□□□ 0.29
LRRC28-213ENST00000559399 ZNF710Q8N1W2 664 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 KLHL23Q8NBE8 558 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 TBCKQ8TEA7 893 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 SLC5A5Q92911 643 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 ZNF274Q96GC6 653 aaPredicted RBP16.87■□□□□ 0.29
LRRC28-213ENST00000559399 TEKT3Q9BXF9 490 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 UPF3BQ9BZI7 483 aaKnown RBP16.87■□□□□ 0.29
LRRC28-213ENST00000559399 TM6SF1Q9BZW5 370 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 AKT3Q9Y243 479 aa16.87■□□□□ 0.29
LRRC28-213ENST00000559399 TBKBP1A7MCY6 615 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 C9IYK1 514 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 PI4K2BG5E9Z4 385 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 ZNF862O60290 1169 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 DNAJB1P25685 340 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 Q4G0T1 1027 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 EFCAB12Q6NXP0 572 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 POTEDQ86YR6 584 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 FAM177A1Q8N128 213 aaPredicted RBP16.86■□□□□ 0.29
LRRC28-213ENST00000559399 LRRC71Q8N4P6 559 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 SPPL3Q8TCT6 385 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 POF1BQ8WVV4 589 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 LRFN3Q9BTN0 628 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 UNC45AQ9H3U1 944 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 IGFLR1Q9H665 355 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 ATP6V0A4Q9HBG4 840 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 AAASQ9NRG9 546 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 NRBP2Q9NSY0 501 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 PRKAG3Q9UGI9 489 aa16.86■□□□□ 0.29
LRRC28-213ENST00000559399 GTF2F1P35269 517 aaKnown RBP eCLIP16.85■□□□□ 0.29
LRRC28-213ENST00000559399 ZP2Q05996 745 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 DLX2Q07687 328 aaPredicted RBP16.85■□□□□ 0.29
LRRC28-213ENST00000559399 UGCGQ16739 394 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 SPOUT1Q5T280 376 aaKnown RBP16.85■□□□□ 0.29
LRRC28-213ENST00000559399 GALNT17Q6IS24 598 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 BLIDQ8IZY5 108 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 LINC01465Q8N7H1 131 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 DAGLBQ8NCG7 672 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 RDM1Q8NG50 284 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 LARP6Q9BRS8 491 aaKnown RBP16.85■□□□□ 0.29
LRRC28-213ENST00000559399 ADAMTS10Q9H324 1103 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 TMEM161AQ9NX61 479 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 PCDHB12Q9Y5F1 795 aa16.85■□□□□ 0.29
LRRC28-213ENST00000559399 TCF20Q9UGU0 1960 aaKnown RBP16.84■□□□□ 0.29
LRRC28-213ENST00000559399 CYP3A7-CYP3A51PA0A087WV96 503 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 GPR37L1O60883 481 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 TBX10O75333 385 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 PSMD10O75832 226 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 TDP2O95551 362 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 EIF4BP23588 611 aaKnown RBP16.84■□□□□ 0.29
LRRC28-213ENST00000559399 CYP3A7P24462 503 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 IRS1P35568 1242 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 NLRP11P59045 1033 aaKnown RBP16.84■□□□□ 0.29
LRRC28-213ENST00000559399 FAM189BP81408 668 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 TBC1D8BQ0IIM8 1120 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 STK3Q13188 491 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 DSC3Q14574 896 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 CLUL1Q15846 466 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 FAM102BQ5T8I3 360 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 ADHFE1Q8IWW8 467 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 GJA10Q969M2 543 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 SCLT1Q96NL6 688 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 ELAC1Q9H777 363 aaKnown RBP16.84■□□□□ 0.29
LRRC28-213ENST00000559399 C11orf16Q9NQ32 467 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
LRRC28-213ENST00000559399 FAM86C2PA6NEL3 165 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 M0R2N6 131 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 LINC01565O15544 149 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 HOXA2O43364 376 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 NCOR1O75376 2440 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 CDKL5O76039 1030 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 FGFR1P11362 822 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 ALADP13716 330 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 NDUFV1P49821 464 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 UBE3AQ05086 875 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 SMAD4Q13485 552 aaKnown RBP16.83■□□□□ 0.28
LRRC28-213ENST00000559399 CSPP1Q1MSJ5 1256 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 RALGAPA2Q2PPJ7 1873 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 MOXD1Q6UVY6 613 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 MIER3Q7Z3K6 550 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 KRT25Q7Z3Z0 450 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 ADGRD2Q7Z7M1 963 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 SEPT9Q9UHD8 586 aaPredicted RBP16.83■□□□□ 0.28
LRRC28-213ENST00000559399 CD207Q9UJ71 328 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 HCN4Q9Y3Q4 1203 aa16.83■□□□□ 0.28
LRRC28-213ENST00000559399 TTC3P53804 2025 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 MBTPS2O43462 519 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 FGF18O76093 207 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 ZSCAN20P17040 1043 aaPredicted RBP16.82■□□□□ 0.28
LRRC28-213ENST00000559399 LAG3P18627 525 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 GPC3P51654 580 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 ADAM15Q13444 863 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 NONOQ15233 471 aaKnown RBP eCLIP16.82■□□□□ 0.28
LRRC28-213ENST00000559399 TARBP2Q15633 366 aaKnown RBP16.82■□□□□ 0.28
LRRC28-213ENST00000559399 NPY5RQ15761 445 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 SMAD2Q15796 467 aaKnown RBP16.82■□□□□ 0.28
LRRC28-213ENST00000559399 EFHBQ8N7U6 833 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 MBOAT7Q96N66 472 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 AIFM3Q96NN9 605 aa16.82■□□□□ 0.28
LRRC28-213ENST00000559399 POP1Q99575 1024 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms