RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 SQORQ9Y6N5 450 aa13.19□□□□□ -0.3
SHF-204ENST00000558685 EPOPA6NHQ4 379 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 TLL1O43897 1013 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 MARCH6O60337 910 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 BAG4O95429 457 aaKnown RBP13.18□□□□□ -0.3
SHF-204ENST00000558685 HTRA4P83105 476 aaPredicted RBP13.18□□□□□ -0.3
SHF-204ENST00000558685 CYP4A11Q02928 519 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 CTTNQ14247 550 aaKnown RBP13.18□□□□□ -0.3
SHF-204ENST00000558685 MTERF2Q49AM1 385 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 TTC38Q5R3I4 469 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 PPP2R2DQ66LE6 453 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 C4orf19Q8IY42 314 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 ZNF668Q96K58 619 aaPredicted RBP13.18□□□□□ -0.3
SHF-204ENST00000558685 RAD9AQ99638 391 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
SHF-204ENST00000558685 LXNQ9BS40 222 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 GINS2Q9Y248 185 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 TRANK1O15050 2925 aa13.18□□□□□ -0.3
SHF-204ENST00000558685 LOXHD1Q8IVV2 1947 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 POTEMA6NI47 508 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 M0QZ92 97 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 MGEA5O60502 916 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 MAFO75444 373 aaPredicted RBP13.17□□□□□ -0.3
SHF-204ENST00000558685 AMHP03971 560 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 TRAPPC10P48553 1259 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
SHF-204ENST00000558685 TBC1D8BQ0IIM8 1120 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 USP38Q8NB14 1042 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 OSMRQ99650 979 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 ZBED2Q9BTP6 218 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 CERS4Q9HA82 394 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 CYP26B1Q9NR63 512 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 TTC3P53804 2025 aa13.17□□□□□ -0.3
SHF-204ENST00000558685 A0A087WWV3 80 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 RFXAPO00287 272 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 UPP2O95045 317 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 LYPLA2O95372 231 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 SPATA31C1P0DKV0 1188 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 NLRP11P59045 1033 aaKnown RBP13.16□□□□□ -0.3
SHF-204ENST00000558685 PAK2Q13177 524 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 FAM228AQ86W67 206 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 TPH2Q8IWU9 490 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
SHF-204ENST00000558685 TSPYL2Q9H2G4 693 aaPredicted RBP13.16□□□□□ -0.3
SHF-204ENST00000558685 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
SHF-204ENST00000558685 LINC01553A4QN01 128 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 CSDE1O75534 798 aaKnown RBP13.15□□□□□ -0.3
SHF-204ENST00000558685 RPS6KA5O75582 802 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 OR52Z1P0C646 297 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 TMOD1P28289 359 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 YWHABP31946 246 aaKnown RBP13.15□□□□□ -0.3
SHF-204ENST00000558685 TECP42680 631 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 GPC3P51654 580 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
SHF-204ENST00000558685 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
SHF-204ENST00000558685 IL17AQ16552 155 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 CEP170P1Q96L14 293 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 DHX33Q9H6R0 707 aaKnown RBP13.15□□□□□ -0.3
SHF-204ENST00000558685 RC3H2Q9HBD1 1191 aaKnown RBP13.15□□□□□ -0.3
SHF-204ENST00000558685 INSL6Q9Y581 213 aa13.15□□□□□ -0.3
SHF-204ENST00000558685 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.15□□□□□ -0.3
SHF-204ENST00000558685 COL4A6Q14031 1691 aa13.15□□□□□ -0.31
SHF-204ENST00000558685 LPXNO60711 386 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 MED24O75448 989 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 LINC00271P0C7V0 271 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 DARSP14868 501 aaKnown RBP13.14□□□□□ -0.31
SHF-204ENST00000558685 FOSL2P15408 326 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 EIF4BP23588 611 aaKnown RBP13.14□□□□□ -0.31
SHF-204ENST00000558685 NFX1Q12986 1120 aaKnown RBP13.14□□□□□ -0.31
SHF-204ENST00000558685 PTGDRQ13258 359 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 DSC3Q14574 896 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 LARP1BQ659C4 914 aaKnown RBP13.14□□□□□ -0.31
SHF-204ENST00000558685 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 CATSPER3Q86XQ3 398 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 KSR1Q8IVT5 923 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 FTHL17Q9BXU8 183 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 XPNPEP1Q9NQW7 623 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
SHF-204ENST00000558685 SUCLA2Q9P2R7 463 aaPredicted RBP13.14□□□□□ -0.31
SHF-204ENST00000558685 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
SHF-204ENST00000558685 KIF3AQ9Y496 699 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 PRRC2BQ5JSZ5 2229 aaKnown RBP13.14□□□□□ -0.31
SHF-204ENST00000558685 PRUNE2Q8WUY3 3088 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 EYSQ5T1H1 3165 aa13.14□□□□□ -0.31
SHF-204ENST00000558685 DKC1O60832 514 aaKnown RBP eCLIP13.13□□□□□ -0.31
SHF-204ENST00000558685 FGFR4P22455 802 aa13.13□□□□□ -0.31
SHF-204ENST00000558685 ERVK-21P61565 698 aa13.13□□□□□ -0.31
SHF-204ENST00000558685 ECM1Q16610 540 aa13.13□□□□□ -0.31
SHF-204ENST00000558685 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
SHF-204ENST00000558685 MAFAQ8NHW3 353 aaPredicted RBP13.13□□□□□ -0.31
SHF-204ENST00000558685 PIGOQ8TEQ8 1089 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms