RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 INPP4AQ96PE3 977 aaPredicted RBP14.46□□□□□ -0.09
PSEN1-220ENST00000557037 TMEM117Q9H0C3 514 aa14.46□□□□□ -0.09
PSEN1-220ENST00000557037 CDHR5Q9HBB8 845 aa14.46□□□□□ -0.09
PSEN1-220ENST00000557037 PCDHGA2Q9Y5H1 932 aa14.46□□□□□ -0.09
PSEN1-220ENST00000557037 GSTTP1A0A1W2PQM5 241 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 NT5C1B-RDH14C9J2C7 533 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 GCOM1H8Y6P7 765 aaPredicted RBP14.45□□□□□ -0.1
PSEN1-220ENST00000557037 LAMTOR5O43504 91 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 RPS6KA5O75582 802 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 POLR2MP0CAP2 368 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 LETM2Q2VYF4 491 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 ZNF528Q3MIS6 628 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 DCLRE1AQ6PJP8 1040 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 SLC39A11Q8N1S5 342 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 ST13P5Q8NFI4 369 aaPredicted RBP14.45□□□□□ -0.1
PSEN1-220ENST00000557037 EPC1Q9H2F5 836 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 SFXN1Q9H9B4 322 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 RNF19AQ9NV58 838 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 TMEM161AQ9NX61 479 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 MAP3K20Q9NYL2 800 aaKnown RBP14.45□□□□□ -0.1
PSEN1-220ENST00000557037 GMEB2Q9UKD1 530 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 ST3GAL5Q9UNP4 418 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 C2orf16Q68DN1 1984 aa14.45□□□□□ -0.1
PSEN1-220ENST00000557037 MAST4O15021 2626 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 RRN3P2A6NIE6 340 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 TRIM6-TRIM34B2RNG4 842 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 RPLP2P05387 115 aaKnown RBP14.44□□□□□ -0.1
PSEN1-220ENST00000557037 METAP2P50579 478 aaKnown RBP eCLIP14.44□□□□□ -0.1
PSEN1-220ENST00000557037 LPAL2Q16609 132 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 ASPRV1Q53RT3 343 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 VPS52Q8N1B4 723 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 LRRC43Q8N309 656 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 NETO1Q8TDF5 533 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 FBXO4Q9UKT5 387 aa14.44□□□□□ -0.1
PSEN1-220ENST00000557037 PROS1P07225 676 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 PARP1P09874 1014 aaKnown RBP14.43□□□□□ -0.1
PSEN1-220ENST00000557037 PMLP29590 882 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 FAM189BP81408 668 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 BMS1Q14692 1282 aaKnown RBP14.43□□□□□ -0.1
PSEN1-220ENST00000557037 PTPN14Q15678 1187 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 N4BP2L1Q5TBK1 243 aaPredicted RBP14.43□□□□□ -0.1
PSEN1-220ENST00000557037 ABI1Q8IZP0 508 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 MIER1Q8N108 512 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 RNF169Q8NCN4 708 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 TMEM40Q8WWA1 233 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 SEPT1Q8WYJ6 367 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 PPP1R16BQ96T49 567 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 SMARCAD1Q9H4L7 1026 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 KAT14Q9H8E8 782 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 ZSCAN32Q9NX65 697 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 PKD2L1Q9P0L9 805 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 PCDHA2Q9Y5H9 948 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 MIA3Q5JRA6 1907 aa14.43□□□□□ -0.1
PSEN1-220ENST00000557037 KDM3AQ9Y4C1 1321 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 ATP9AO75110 1047 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 FGAP02671 866 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 ALX1Q15699 326 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 TSSK4Q6SA08 328 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 MFSD6Q6ZSS7 791 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 STAG2Q8N3U4 1231 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 ZBTB44Q8NCP5 570 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 BORCS6Q96GS4 357 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 MYADMQ96S97 322 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 SENP7Q9BQF6 1050 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 BCO2Q9BYV7 579 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 ZBP1Q9H171 429 aa14.42□□□□□ -0.1
PSEN1-220ENST00000557037 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
PSEN1-220ENST00000557037 DSPP15924 2871 aaKnown RBP14.41□□□□□ -0.1
PSEN1-220ENST00000557037 SOBPA7XYQ1 873 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 TBC1D4O60343 1298 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 LILRB5O75023 590 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 STAM2O75886 525 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 PLCB4Q15147 1175 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 DGKHQ86XP1 1220 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 TBC1D10CQ8IV04 446 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 TMEM169Q96HH4 297 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 ELAC1Q9H777 363 aaKnown RBP14.41□□□□□ -0.1
PSEN1-220ENST00000557037 ZMIZ1Q9ULJ6 1067 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 MTF2Q9Y483 593 aaPredicted RBP14.41□□□□□ -0.1
PSEN1-220ENST00000557037 COL4A3Q01955 1670 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 DOCK8Q8NF50 2099 aa14.41□□□□□ -0.1
PSEN1-220ENST00000557037 SPEGQ15772 3267 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 ZBTB5O15062 677 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 HOXA2O43364 376 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 GDF9O60383 454 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 BCAR1P56945 870 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 UBXN2BQ14CS0 331 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 CLLU1OSQ5K130 101 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 TMEM173Q86WV6 379 aaPredicted RBP14.4□□□□□ -0.1
PSEN1-220ENST00000557037 HOMER1Q86YM7 354 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 NME8Q8N427 588 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 SAMD3Q8N6K7 520 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 PCYT2Q99447 389 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 ZBTB40Q9NUA8 1239 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 EPS15L1Q9UBC2 864 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 NEDD4P46934 1319 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 FRMPD4Q14CM0 1322 aa14.4□□□□□ -0.1
PSEN1-220ENST00000557037 SMIM35A0A1B0GVV1 85 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 GPR182O15218 404 aa14.39□□□□□ -0.11
PSEN1-220ENST00000557037 ZIC2O95409 532 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms