RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 SQORQ9Y6N5 450 aa27.45■■□□□ 1.98
SDR39U1-221ENST00000556707 PTPRSQ13332 1948 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 ZBBXA8MT70 800 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 VTNP04004 478 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 ZSCAN22P10073 491 aaPredicted RBP27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 CCT6AP40227 531 aaKnown RBP27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 RFC5P40937 340 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 LPIN1Q14693 890 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 TCTN1Q2MV58 587 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 ZNF710Q8N1W2 664 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 PIGOQ8TEQ8 1089 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 SEPT8Q92599 483 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 DHX33Q9H6R0 707 aaKnown RBP27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 GBF1Q92538 1859 aa27.44■■□□□ 1.98
SDR39U1-221ENST00000556707 VWA3AA6NCI4 1184 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 RBAK-RBAKDNI3L0D1 243 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 DNM2P50570 870 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 MKRN4PQ13434 485 aaPredicted RBP27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 POTEGQ6S5H5 508 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 TSHZ1Q6ZSZ6 1077 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 SNX29Q8TEQ0 813 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 SLC7A3Q8WY07 619 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 NACC1Q96RE7 527 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 IFIH1Q9BYX4 1025 aaKnown RBP27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 SLC4A7Q9Y6M7 1214 aa27.43■■□□□ 1.98
SDR39U1-221ENST00000556707 ABHD14A-ACY1A0A1B0GW23 586 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 PP2D1A8MPX8 630 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 SOX1O00570 391 aaPredicted RBP27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 GPR32O75388 356 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 RARRES1P49788 294 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 FXR1P51114 621 aaKnown RBP eCLIP27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 POLGP54098 1239 aaPredicted RBP27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 DRP2Q13474 957 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 PKP1Q13835 747 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 IKBKEQ14164 716 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 PTPAQ15257 358 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 KIZQ2M2Z5 673 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 FOXD4L5Q5VV16 416 aaPredicted RBP27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 KRT79Q5XKE5 535 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 USP38Q8NB14 1042 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 FOXD4L4Q8WXT5 416 aaPredicted RBP27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 APBB2Q92870 758 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 CDHR5Q9HBB8 845 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 GINS2Q9Y248 185 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 MYO9BQ13459 2157 aa27.42■■□□□ 1.98
SDR39U1-221ENST00000556707 A0A087WWV3 80 aa27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 EFCAB14O75071 495 aa27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 CDC25AP30304 524 aa27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 CRYBB1P53674 252 aaPredicted RBP27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 NLRP11P59045 1033 aaKnown RBP27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 ECM1Q16610 540 aa27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 CCDC43Q96MW1 224 aaKnown RBP27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 USP28Q96RU2 1077 aa27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 PPP1R16BQ96T49 567 aa27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 MMTAG2Q9BU76 263 aaKnown RBP27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 AGO3Q9H9G7 860 aaKnown RBP27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 DBR1Q9UK59 544 aaKnown RBP27.41■■□□□ 1.98
SDR39U1-221ENST00000556707 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.4■■□□□ 1.98
SDR39U1-221ENST00000556707 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.4■■□□□ 1.98
SDR39U1-221ENST00000556707 GAS2O43903 313 aaKnown RBP27.4■■□□□ 1.98
SDR39U1-221ENST00000556707 F13A1P00488 732 aa27.4■■□□□ 1.98
SDR39U1-221ENST00000556707 EMC2Q15006 297 aa27.4■■□□□ 1.98
SDR39U1-221ENST00000556707 ADAMTS10Q9H324 1103 aa27.4■■□□□ 1.98
SDR39U1-221ENST00000556707 SUCLA2Q9P2R7 463 aaPredicted RBP27.4■■□□□ 1.98
SDR39U1-221ENST00000556707 KCNJ6P48051 423 aa27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 GPC3P51654 580 aa27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 WDR5P61964 334 aaKnown RBP27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 SMAD3P84022 425 aaKnown RBP27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 CDC42EP1Q00587 391 aa27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 CEBPZQ03701 1054 aaKnown RBP27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 FAM109BQ6ICB4 259 aaPredicted RBP27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 AK8Q96MA6 479 aa27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 OSMRQ99650 979 aa27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 KIAA1024Q9UPX6 916 aa27.39■■□□□ 1.98
SDR39U1-221ENST00000556707 TTC3P53804 2025 aa27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 DGAT1O75907 488 aa27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 CD52P31358 61 aa27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 TMEM40Q8WWA1 233 aa27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 LRCH3Q96II8 777 aa27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 ZNF396Q96N95 335 aaPredicted RBP27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 SLC9A7Q96T83 725 aa27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 MTRQ99707 1265 aa27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 XPNPEP1Q9NQW7 623 aa27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 BMP2KQ9NSY1 1161 aaPredicted RBP27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 DDX19AQ9NUU7 478 aaKnown RBP27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 MORC2Q9Y6X9 1032 aaPredicted RBP27.38■■□□□ 1.97
SDR39U1-221ENST00000556707 ATP2A2P16615 1042 aaKnown RBP27.37■■□□□ 1.97
SDR39U1-221ENST00000556707 PHOSPHO2Q8TCD6 241 aa27.37■■□□□ 1.97
SDR39U1-221ENST00000556707 TCP11Q8WWU5 503 aa27.37■■□□□ 1.97
SDR39U1-221ENST00000556707 TMEM143Q96AN5 459 aa27.37■■□□□ 1.97
SDR39U1-221ENST00000556707 ATP6V0A4Q9HBG4 840 aa27.37■■□□□ 1.97
SDR39U1-221ENST00000556707 PADI3Q9ULW8 664 aa27.37■■□□□ 1.97
SDR39U1-221ENST00000556707 NOC2LQ9Y3T9 749 aaKnown RBP27.37■■□□□ 1.97
SDR39U1-221ENST00000556707 TCHHQ07283 1943 aa27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 GRXCR1A8MXD5 290 aa27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 MARCKSP29966 332 aaPredicted RBP27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 LONP1P36776 959 aaKnown RBP27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 NASPP49321 788 aaPredicted RBP27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 GRIN1Q05586 938 aa27.36■■□□□ 1.97
SDR39U1-221ENST00000556707 PAK2Q13177 524 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms