RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 C17orf80Q9BSJ5 609 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 NIFKQ9BYG3 293 aaKnown RBP9.12□□□□□ -0.95
VTI1B-206ENST00000556461 ADAMTS10Q9H324 1103 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 RGL1Q9NZL6 768 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 EVPLQ92817 2033 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 A0A087WWV3 80 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 M0QZ92 97 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 MAGEB2O15479 319 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 RPLP2P05387 115 aaKnown RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 IBSPP21815 317 aaPredicted RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 GATMP50440 423 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 NLRP11P59045 1033 aaKnown RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 ERVK-21P61565 698 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 PSMC5P62195 406 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 HMGN5P82970 282 aaKnown RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 CYP4A11Q02928 519 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 PAK2Q13177 524 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 GRB10Q13322 594 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 CTTNQ14247 550 aaKnown RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 NBR1Q14596 966 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 EPHA7Q15375 998 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 XKR3Q5GH77 459 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 CRIPAKQ8N1N5 446 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 MICALL1Q8N3F8 863 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 GDPD5Q8WTR4 605 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 TMX3Q96JJ7 454 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 NAP1L4Q99733 375 aaKnown RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 SUGCTQ9HAC7 445 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 RC3H2Q9HBD1 1191 aaKnown RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 ST3GAL5Q9UNP4 418 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 CEP131Q9UPN4 1083 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 AKT3Q9Y243 479 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 INSL6Q9Y581 213 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 MTCH2Q9Y6C9 303 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 SQORQ9Y6N5 450 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 MYH9P35579 1960 aaKnown RBP9.11□□□□□ -0.95
VTI1B-206ENST00000556461 WDR81Q562E7 1941 aa9.11□□□□□ -0.95
VTI1B-206ENST00000556461 COL4A6Q14031 1691 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 IGKV6-21A0A0C4DH24 114 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 ST18O60284 1047 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 MARCH6O60337 910 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 NEMFO60524 1076 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 CSDE1O75534 798 aaKnown RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 RPS6KA5O75582 802 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 SLITRK3O94933 977 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 P4HBP07237 508 aaKnown RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 LINC00271P0C7V0 271 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 FGFR4P22455 802 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 MCM7P33993 719 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 TXKP42681 527 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 QARSP47897 775 aaKnown RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 GPC3P51654 580 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 CRYBB1P53674 252 aaPredicted RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 TBC1D8BQ0IIM8 1120 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 SAFBQ15424 915 aaKnown RBP eCLIP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 ZNF174Q15697 407 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 CALCRLQ16602 461 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 KSR1Q8IVT5 923 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 FAM184AQ8NB25 1140 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 TGS1Q96RS0 853 aaKnown RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 YME1L1Q96TA2 773 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 LXNQ9BS40 222 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 BACH2Q9BYV9 841 aa9.1□□□□□ -0.95
VTI1B-206ENST00000556461 TSPYL2Q9H2G4 693 aaPredicted RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 FOXP1Q9H334 677 aaPredicted RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 UPF2Q9HAU5 1272 aaKnown RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 BMP2KQ9NSY1 1161 aaPredicted RBP9.1□□□□□ -0.95
VTI1B-206ENST00000556461 LOXHD1Q8IVV2 1947 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 TTC3P53804 2025 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 POTEMA6NI47 508 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 MAFO75444 373 aaPredicted RBP9.09□□□□□ -0.95
VTI1B-206ENST00000556461 BAG4O95429 457 aaKnown RBP9.09□□□□□ -0.95
VTI1B-206ENST00000556461 POU3F3P20264 500 aaPredicted RBP9.09□□□□□ -0.95
VTI1B-206ENST00000556461 TOB1P50616 345 aaPredicted RBP9.09□□□□□ -0.95
VTI1B-206ENST00000556461 DSC3Q14574 896 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 PPP4R3CPQ6ZMV5 832 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 NOSTRINQ8IVI9 506 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 SLFN12Q8IYM2 578 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 ZNF689Q96CS4 500 aaPredicted RBP9.09□□□□□ -0.95
VTI1B-206ENST00000556461 MAP7D2Q96T17 732 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 ADAM2Q99965 735 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 HSD17B14Q9BPX1 270 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 EIF2AK1Q9BQI3 630 aaKnown RBP9.09□□□□□ -0.95
VTI1B-206ENST00000556461 FTHL17Q9BXU8 183 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 TTC12Q9H892 705 aaPredicted RBP9.09□□□□□ -0.95
VTI1B-206ENST00000556461 CYP26B1Q9NR63 512 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 SUCLA2Q9P2R7 463 aaPredicted RBP9.09□□□□□ -0.95
VTI1B-206ENST00000556461 PCDHA12Q9UN75 941 aa9.09□□□□□ -0.95
VTI1B-206ENST00000556461 MUC3AQ02505 3323 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 COL4A4P53420 1690 aaPredicted RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 A0A087WZ62 844 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 C9IYK1 514 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 DGKIO75912 1065 aa9.08□□□□□ -0.96
VTI1B-206ENST00000556461 DARSP14868 501 aaKnown RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 EIF4BP23588 611 aaKnown RBP9.08□□□□□ -0.96
VTI1B-206ENST00000556461 U2AF2P26368 475 aaKnown RBP eCLIP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms