RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ZNF444Q8N0Y2 327 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-236ENST00000556220 STK11IPQ8N1F8 1099 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 TMEM57Q8N5G2 664 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 COPS5Q92905 334 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 CEP95Q96GE4 821 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 C1orf115Q9H7X2 142 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 ARPP21Q9UBL0 812 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-236ENST00000556220 DMGDHQ9UI17 866 aaKnown RBP8.12□□□□□ -1.11
ATXN3-236ENST00000556220 SLC6A14Q9UN76 642 aa8.12□□□□□ -1.11
ATXN3-236ENST00000556220 LOC730098B7Z3J9 87 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 LGR5O75473 907 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 CHGBP05060 677 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 EPB42P16452 691 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 SLC1A4P43007 532 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 ID4P47928 161 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 VCPP55072 806 aaKnown RBP8.11□□□□□ -1.11
ATXN3-236ENST00000556220 SNAP25P60880 206 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 SIGLEC14Q08ET2 396 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 HYAL1Q12794 435 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 IKQ13123 557 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-236ENST00000556220 PPP2R5BQ15173 497 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 ASCL5Q7RTU5 278 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 FBXO11Q86XK2 927 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 Q8N3U1 123 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 SCFD2Q8WU76 684 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 KAT2BQ92831 832 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 PNMA5Q96PV4 448 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 YME1L1Q96TA2 773 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 IL1RAPL2Q9NP60 686 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 CD207Q9UJ71 328 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 ISY1Q9ULR0 285 aaKnown RBP8.11□□□□□ -1.11
ATXN3-236ENST00000556220 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-236ENST00000556220 TRIP12Q14669 1992 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-236ENST00000556220 NAV1Q8NEY1 1877 aa8.11□□□□□ -1.11
ATXN3-236ENST00000556220 NCOR2Q9Y618 2525 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 MINDY4BA8MYZ0 360 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 H0Y858 1186 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 RBAK-RBAKDNI3L0D1 243 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 PRDM1O75626 825 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 EYA4O95677 639 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 RB1P06400 928 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 TXNP10599 105 aaKnown RBP8.1□□□□□ -1.11
ATXN3-236ENST00000556220 MCCP23508 829 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 ITGB7P26010 798 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 CBX2Q14781 532 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-236ENST00000556220 PCSK7Q16549 785 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 TRIM71Q2Q1W2 868 aaKnown RBP8.1□□□□□ -1.11
ATXN3-236ENST00000556220 ZNF618Q5T7W0 954 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 GIMAP6Q6P9H5 292 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 DBF4BQ8NFT6 615 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 FRAT1Q92837 279 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-236ENST00000556220 TOP1MTQ969P6 601 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 ASIC4Q96FT7 647 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 STRBPQ96SI9 672 aaKnown RBP8.1□□□□□ -1.11
ATXN3-236ENST00000556220 FSD1Q9BTV5 496 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.1□□□□□ -1.11
ATXN3-236ENST00000556220 PUS7LQ9H0K6 701 aaKnown RBP8.1□□□□□ -1.11
ATXN3-236ENST00000556220 BOLA2Q9H3K6 86 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 IGFLR1Q9H665 355 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 ZNF287Q9HBT7 754 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 TLR9Q9NR96 1032 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 PAG1Q9NWQ8 432 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 HDAC6Q9UBN7 1215 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 CCPG1Q9ULG6 757 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 EXOC6BQ9Y2D4 811 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 VPS13AQ96RL7 3174 aa8.1□□□□□ -1.11
ATXN3-236ENST00000556220 COL4A4P53420 1690 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-236ENST00000556220 PRR23AA6NEV1 266 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 GSG1L2A8MUP6 293 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 C9orf172C9J069 976 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 C5orf67F2Z3F1 127 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 ICAM1P05362 532 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 CASTP20810 708 aaKnown RBP8.09□□□□□ -1.11
ATXN3-236ENST00000556220 EDNRBP24530 442 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 PDE4BQ07343 736 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 TBC1D8BQ0IIM8 1120 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 ADAM15Q13444 863 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 GRIK4Q16099 956 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 RSPO4Q2I0M5 234 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-236ENST00000556220 RCSD1Q6JBY9 416 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 KCTD1Q719H9 257 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 CLASRPQ8N2M8 674 aaKnown RBP8.09□□□□□ -1.11
ATXN3-236ENST00000556220 C7orf31Q8N865 590 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 AFG1LQ8WV93 481 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 WNT8BQ93098 351 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 CHMP4CQ96CF2 233 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 LMAN2LQ9H0V9 348 aa8.09□□□□□ -1.11
ATXN3-236ENST00000556220 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-236ENST00000556220 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
ATXN3-236ENST00000556220 EMSYQ7Z589 1322 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 PTPRSQ13332 1948 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 PTPDC1A2A3K4 754 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 NFIBO00712 420 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 GRM6O15303 877 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 TBX10O75333 385 aa8.08□□□□□ -1.12
ATXN3-236ENST00000556220 ARIH2O95376 493 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms