RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 RNFT1Q5M7Z0 435 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 LRCH2Q5VUJ6 765 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 E4F1Q66K89 784 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 PRICKLE2Q7Z3G6 844 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 PPFIBP1Q86W92 1011 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 GPBP1Q86WP2 473 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 TMEM139Q8IV31 216 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 CNGA4Q8IV77 575 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 MYOCDQ8IZQ8 938 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 MB21D1Q8N884 522 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 RETREG2Q8NC44 543 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 REPS2Q8NFH8 660 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 NEK9Q8TD19 979 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 SYTL5Q8TDW5 730 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 BAG1Q99933 345 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 EIF2AK1Q9BQI3 630 aaKnown RBP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 TANGO6Q9C0B7 1094 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 FHDC1Q9C0D6 1143 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 HOXC10Q9NYD6 342 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 GGA3Q9NZ52 723 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 KCND2Q9NZV8 630 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 SCAF8Q9UPN6 1271 aaKnown RBP9.2□□□□□ -0.94
ATXN3-235ENST00000556082 AFG3L2Q9Y4W6 797 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 PAXBP1Q9Y5B6 917 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 UBIAD1Q9Y5Z9 338 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 ZHX2Q9Y6X8 837 aa9.2□□□□□ -0.94
ATXN3-235ENST00000556082 TRIM49BA6NDI0 452 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 EML1O00423 815 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 NFIBO00712 420 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 MAFGO15525 162 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 GAS7O60861 476 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 GNA14O95837 355 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 TPM2P07951 284 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 TPM1P09493 284 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 IDEP14735 1019 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 ITGB5P18084 799 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 SRSF11Q05519 484 aaKnown RBP9.19□□□□□ -0.94
ATXN3-235ENST00000556082 COASYQ13057 564 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 CLN3Q13286 438 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 GIT2Q14161 759 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 ZCWPW2Q504Y3 356 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 DNTTIP2Q5QJE6 756 aaKnown RBP9.19□□□□□ -0.94
ATXN3-235ENST00000556082 FAM26FQ5R3K3 315 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 ZNF385CQ66K41 422 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-235ENST00000556082 NCAPH2Q6IBW4 605 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 CATSPERGQ6ZRH7 1159 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 DYMQ7RTS9 669 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 ZC3H3Q8IXZ2 948 aaKnown RBP9.19□□□□□ -0.94
ATXN3-235ENST00000556082 ZKSCAN4Q969J2 545 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-235ENST00000556082 CEP63Q96MT8 703 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 NACC1Q96RE7 527 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 TSG101Q99816 390 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 TUBGCP2Q9BSJ2 902 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 ZNF577Q9BSK1 485 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 NUP58Q9BVL2 599 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 TEKT3Q9BXF9 490 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 RAVER2Q9HCJ3 691 aaKnown RBP9.19□□□□□ -0.94
ATXN3-235ENST00000556082 SLC39A2Q9NP94 309 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 JADE2Q9NQC1 790 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 TAB2Q9NYJ8 693 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 COL20A1Q9P218 1284 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 DYRK1BQ9Y463 629 aa9.19□□□□□ -0.94
ATXN3-235ENST00000556082 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-235ENST00000556082 GOLGA6L9A6NEM1 432 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 MEN1O00255 615 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 IPO5O00410 1097 aaKnown RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 DHX15O43143 795 aaKnown RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 ZSCAN12O43309 604 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 MFAP3LO75121 409 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 LYPLA2O95372 231 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 ARP10275 920 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 ALAS1P13196 640 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 GAP43P17677 238 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 MARSP56192 900 aaKnown RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 PSMC6P62333 389 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 RPS6P62753 249 aaKnown RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 FKBP3Q00688 224 aaKnown RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 UBXN1Q04323 297 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 RBL2Q08999 1139 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 PTPN14Q15678 1187 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 BMT2Q1RMZ1 405 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 EDRF1Q3B7T1 1238 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 HERC4Q5GLZ8 1057 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 FIGNQ5HY92 759 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 RNF207Q6ZRF8 634 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 EPM2AIP1Q7L775 607 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 CPXCR1Q8N123 301 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 TMEM151AQ8N4L1 468 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 SVOPQ8N4V2 548 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 DCPSQ96C86 337 aaKnown RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 TRERF1Q96PN7 1200 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 ERGIC2Q96RQ1 377 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 SYT17Q9BSW7 474 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 GRIP2Q9C0E4 1043 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 VPS16Q9H269 839 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 AGO4Q9HCK5 861 aaKnown RBP9.18□□□□□ -0.94
ATXN3-235ENST00000556082 KCNH7Q9NS40 1196 aa9.18□□□□□ -0.94
ATXN3-235ENST00000556082 TBC1D22BQ9NU19 505 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms