RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	GOLGA6L19	H0YKK7	550 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	RNF225	M0QZC1	329 aa	Predicted RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	ATP2A1	O14983	1001 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	ADAMTS3	O15072	1205 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	TDP2	O95551	362 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	SLC25A27	O95847	323 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	SLFN14	P0C7P3	912 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	EPX	P11678	715 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	EPB42	P16452	691 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	CCND2	P30279	289 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	DEK	P35659	375 aa	Known RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	SCNN1A	P37088	669 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	HSD17B4	P51659	736 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	CCNA1	P78396	465 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	SET	Q01105	290 aa	Predicted RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	LONRF3	Q496Y0	759 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067		Q4G0T1	1027 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	IER5	Q5VY09	327 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	HAUS3	Q68CZ6	603 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	NLRX1	Q86UT6	975 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	PLA2G4D	Q86XP0	818 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	TREML1	Q86YW5	311 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	ANKRD35	Q8N283	1001 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	C4orf32	Q8N8J7	132 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	SMCR8	Q8TEV9	937 aa	Predicted RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	SMARCE1	Q969G3	411 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	SCARF2	Q96GP6	870 aa	Predicted RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	EPSTI1	Q96J88	318 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	PAGR1	Q9BTK6	254 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	GTPBP4	Q9BZE4	634 aa	Known RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	NT5C3A	Q9H0P0	336 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	TTC12	Q9H892	705 aa	Predicted RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	MAGEF1	Q9HAY2	307 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	NMRK2	Q9NPI5	230 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	RMND1	Q9NWS8	449 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	ADD3	Q9UEY8	706 aa	Known RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	ADAMTS5	Q9UNA0	930 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	MRVI1	Q9Y6F6	885 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	PFAS	O15067	1338 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	ZNF536	O15090	1300 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	KDM3A	Q9Y4C1	1321 aa		6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	CCL15-CCL14	A0A0B4J2E2	113 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	SMTNL1	A8MU46	457 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	NFIB	O00712	420 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	GAS7	O60861	476 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	MYL1	P05976	194 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	ZBTB48	P10074	688 aa	Predicted RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	MYCL	P12524	364 aa	Predicted RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	CIITA	P33076	1130 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	CCT6A	P40227	531 aa	Known RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	ARSD	P51689	593 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	HUNK	P57058	714 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	HERVK_113	P62684	666 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	RPS6	P62753	249 aa	Known RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	GHRHR	Q02643	423 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	GRIN1	Q05586	938 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	BAAT	Q14032	418 aa	Predicted RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	KCTD2	Q14681	263 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	TMEM132B	Q14DG7	1078 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	POSTN	Q15063	836 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	CCL15	Q16663	113 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	UVSSA	Q2YD98	709 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	GNPTAB	Q3T906	1256 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	CEP55	Q53EZ4	464 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	TREML2	Q5T2D2	321 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	WDR78	Q5VTH9	848 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	RBM43	Q6ZSC3	357 aa	Known RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	NCAPG2	Q86XI2	1143 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	RIOX2	Q8IUF8	465 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	RGL4	Q8IZJ4	473 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	NSUN6	Q8TEA1	469 aa	Known RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	SNX29	Q8TEQ0	813 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	CLEC4D	Q8WXI8	215 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	WNK4	Q96J92	1243 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	CDHR1	Q96JP9	859 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	BTBD6	Q96KE9	485 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	MTMR9	Q96QG7	549 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	RMDN3	Q96TC7	470 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	P2RX7	Q99572	595 aa	Known RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	WDR11	Q9BZH6	1224 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	CCSER1	Q9C0I3	900 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	ASCC2	Q9H1I8	757 aa	Predicted RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	TMEM60	Q9H2L4	133 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	MROH8	Q9H579	483 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	AVEN	Q9NQS1	362 aa	Predicted RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	DISC1	Q9NRI5	854 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	SEPT3	Q9UH03	358 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	DMGDH	Q9UI17	866 aa	Known RBP	6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	SLC45A1	Q9Y2W3	748 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	MYH15	Q9Y2K3	1946 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	ATAD5	Q96QE3	1844 aa		6.22	□□□□□ -1.41
ATL1-208	ENST00000556067	FSD2	A1L4K1	749 aa		6.21	□□□□□ -1.42
ATL1-208	ENST00000556067	MANSC4	A6NHS7	340 aa	Predicted RBP	6.21	□□□□□ -1.42
ATL1-208	ENST00000556067	TMEM88B	A6NKF7	163 aa		6.21	□□□□□ -1.42
ATL1-208	ENST00000556067	PDHX	O00330	501 aa		6.21	□□□□□ -1.42
ATL1-208	ENST00000556067	OPLAH	O14841	1288 aa		6.21	□□□□□ -1.42
ATL1-208	ENST00000556067	MAFG	O15525	162 aa		6.21	□□□□□ -1.42
ATL1-208	ENST00000556067	SLC37A4	O43826	429 aa		6.21	□□□□□ -1.42
ATL1-208	ENST00000556067	STAM2	O75886	525 aa		6.21	□□□□□ -1.42

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