RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 OSMRQ99650 979 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 LXNQ9BS40 222 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 TMX1Q9H3N1 280 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 RGL1Q9NZL6 768 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 NOC2LQ9Y3T9 749 aaKnown RBP23.02■■□□□ 1.28
VTI1B-205ENST00000555543 REV3LO60673 3130 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 LINC01553A4QN01 128 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 DDX11L8A8MPP1 907 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 P4HBP07237 508 aaKnown RBP23.01■■□□□ 1.27
VTI1B-205ENST00000555543 MCM7P33993 719 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 RTN4RL1Q86UN2 441 aaPredicted RBP23.01■■□□□ 1.27
VTI1B-205ENST00000555543 NOSTRINQ8IVI9 506 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 ARNTL2Q8WYA1 636 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 DYDC2Q96IM9 177 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 MAP7D2Q96T17 732 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 SUGCTQ9HAC7 445 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 ERVK-5Q9HDB9 667 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 AKT3Q9Y243 479 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 INSL6Q9Y581 213 aa23.01■■□□□ 1.27
VTI1B-205ENST00000555543 A0A0C4DFX4 3053 aa23■■□□□ 1.27
VTI1B-205ENST00000555543 COL4A4P53420 1690 aaPredicted RBP23■■□□□ 1.27
VTI1B-205ENST00000555543 CRYBB1P53674 252 aaPredicted RBP23■■□□□ 1.27
VTI1B-205ENST00000555543 CYP4A11Q02928 519 aa23■■□□□ 1.27
VTI1B-205ENST00000555543 ZNF579Q8NAF0 562 aaKnown RBP23■■□□□ 1.27
VTI1B-205ENST00000555543 SP7Q8TDD2 431 aaPredicted RBP23■■□□□ 1.27
VTI1B-205ENST00000555543 ZNF668Q96K58 619 aaPredicted RBP23■■□□□ 1.27
VTI1B-205ENST00000555543 ADAMTS10Q9H324 1103 aa23■■□□□ 1.27
VTI1B-205ENST00000555543 TTC12Q9H892 705 aaPredicted RBP23■■□□□ 1.27
VTI1B-205ENST00000555543 PCDHA12Q9UN75 941 aa23■■□□□ 1.27
VTI1B-205ENST00000555543 COL4A6Q14031 1691 aa23■■□□□ 1.27
VTI1B-205ENST00000555543 IGKV6-21A0A0C4DH24 114 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 MGEA5O60502 916 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 RPS6KA5O75582 802 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 TMOD1P28289 359 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 TXKP42681 527 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 MCM2P49736 904 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 NPEPPSP55786 919 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 NLRP11P59045 1033 aaKnown RBP22.99■■□□□ 1.27
VTI1B-205ENST00000555543 NFX1Q12986 1120 aaKnown RBP22.99■■□□□ 1.27
VTI1B-205ENST00000555543 CTTNQ14247 550 aaKnown RBP22.99■■□□□ 1.27
VTI1B-205ENST00000555543 YME1L1Q96TA2 773 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 TSPYL2Q9H2G4 693 aaPredicted RBP22.99■■□□□ 1.27
VTI1B-205ENST00000555543 MTUS1Q9ULD2 1270 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 TTC3P53804 2025 aa22.99■■□□□ 1.27
VTI1B-205ENST00000555543 IGFBP4P22692 258 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 U2AF2P26368 475 aaKnown RBP eCLIP22.98■■□□□ 1.27
VTI1B-205ENST00000555543 GJB2P29033 226 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 GNL2Q13823 731 aaKnown RBP22.98■■□□□ 1.27
VTI1B-205ENST00000555543 NBR1Q14596 966 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 ZNF174Q15697 407 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 FAM228AQ86W67 206 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 C4orf19Q8IY42 314 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 EIF2AK1Q9BQI3 630 aaKnown RBP22.98■■□□□ 1.27
VTI1B-205ENST00000555543 FTHL17Q9BXU8 183 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 RC3H2Q9HBD1 1191 aaKnown RBP22.98■■□□□ 1.27
VTI1B-205ENST00000555543 CYP26B1Q9NR63 512 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 ST3GAL5Q9UNP4 418 aa22.98■■□□□ 1.27
VTI1B-205ENST00000555543 POTEMA6NI47 508 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 ZBTB39O15060 712 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 MAFO75444 373 aaPredicted RBP22.97■■□□□ 1.27
VTI1B-205ENST00000555543 SLITRK3O94933 977 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 GPC3P51654 580 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 ERVK-21P61565 698 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 TTC38Q5R3I4 469 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 CRIPAKQ8N1N5 446 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 TGS1Q96RS0 853 aaKnown RBP22.97■■□□□ 1.27
VTI1B-205ENST00000555543 HSD17B14Q9BPX1 270 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 C17orf80Q9BSJ5 609 aa22.97■■□□□ 1.27
VTI1B-205ENST00000555543 ARID2Q68CP9 1835 aa22.96■■□□□ 1.27
VTI1B-205ENST00000555543 DKC1O60832 514 aaKnown RBP eCLIP22.96■■□□□ 1.27
VTI1B-205ENST00000555543 TPH2Q8IWU9 490 aa22.96■■□□□ 1.27
VTI1B-205ENST00000555543 GDPD5Q8WTR4 605 aa22.96■■□□□ 1.27
VTI1B-205ENST00000555543 ZSWIM4Q9H7M6 989 aa22.96■■□□□ 1.27
VTI1B-205ENST00000555543 LPXNO60711 386 aa22.95■■□□□ 1.26
VTI1B-205ENST00000555543 YWHABP31946 246 aaKnown RBP22.95■■□□□ 1.26
VTI1B-205ENST00000555543 TOB1P50616 345 aaPredicted RBP22.95■■□□□ 1.26
VTI1B-205ENST00000555543 GRB10Q13322 594 aa22.95■■□□□ 1.26
VTI1B-205ENST00000555543 SLC17A8Q8NDX2 589 aa22.95■■□□□ 1.26
VTI1B-205ENST00000555543 CEP170P1Q96L14 293 aa22.95■■□□□ 1.26
VTI1B-205ENST00000555543 KIF3AQ9Y496 699 aa22.95■■□□□ 1.26
VTI1B-205ENST00000555543 GPR182O15218 404 aa22.94■■□□□ 1.26
VTI1B-205ENST00000555543 OR52Z1P0C646 297 aa22.94■■□□□ 1.26
VTI1B-205ENST00000555543 EIF4BP23588 611 aaKnown RBP22.94■■□□□ 1.26
VTI1B-205ENST00000555543 TRAPPC10P48553 1259 aa22.94■■□□□ 1.26
VTI1B-205ENST00000555543 ORC2Q13416 577 aaPredicted RBP22.94■■□□□ 1.26
VTI1B-205ENST00000555543 PPM1EQ8WY54 764 aa22.94■■□□□ 1.26
VTI1B-205ENST00000555543 ZNF689Q96CS4 500 aaPredicted RBP22.94■■□□□ 1.26
VTI1B-205ENST00000555543 ADAM2Q99965 735 aa22.94■■□□□ 1.26
VTI1B-205ENST00000555543 DHX33Q9H6R0 707 aaKnown RBP22.94■■□□□ 1.26
VTI1B-205ENST00000555543 BMP2KQ9NSY1 1161 aaPredicted RBP22.94■■□□□ 1.26
VTI1B-205ENST00000555543 NOL7Q9UMY1 257 aaKnown RBP22.94■■□□□ 1.26
VTI1B-205ENST00000555543 MTCH2Q9Y6C9 303 aa22.94■■□□□ 1.26
VTI1B-205ENST00000555543 ADGRA3Q8IWK6 1321 aa22.93■■□□□ 1.26
VTI1B-205ENST00000555543 CSDE1O75534 798 aaKnown RBP22.93■■□□□ 1.26
VTI1B-205ENST00000555543 LYPLA2O95372 231 aa22.93■■□□□ 1.26
VTI1B-205ENST00000555543 DARSP14868 501 aaKnown RBP22.93■■□□□ 1.26
VTI1B-205ENST00000555543 FGFR4P22455 802 aa22.93■■□□□ 1.26
VTI1B-205ENST00000555543 DSC3Q14574 896 aa22.93■■□□□ 1.26
VTI1B-205ENST00000555543 NPAS4Q8IUM7 802 aa22.93■■□□□ 1.26
VTI1B-205ENST00000555543 C4orf32Q8N8J7 132 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms