RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ZSCAN20P17040 1043 aaPredicted RBP7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 RGS3P49796 1198 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 NCKAP1LP55160 1127 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 MRPS9P82933 396 aaKnown RBP7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 MLANAQ16655 118 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 CT83Q5H943 113 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 ZBTB41Q5SVQ8 909 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 Q8N3U1 123 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 RELTQ969Z4 430 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 EAF2Q96CJ1 260 aaPredicted RBP7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 RTFDC1Q9BY42 306 aaPredicted RBP7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 OR10A5Q9H207 317 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 IP6K2Q9UHH9 426 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 WASF3Q9UPY6 502 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 INVSQ9Y283 1065 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 GIT1Q9Y2X7 761 aa7.16□□□□□ -1.26
CKS1BP1-201ENST00000555221 CYP7B1O75881 506 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 U2AF1L5P0DN76 240 aaPredicted RBP7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 VCAM1P19320 739 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 IGFBP6P24592 240 aaPredicted RBP7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 THBS2P35442 1172 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 ITGA1P56199 1179 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 U2AF1Q01081 240 aaKnown RBP eCLIP7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 NFATC3Q12968 1075 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 ACAP2Q15057 778 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 PITRM1Q5JRX3 1037 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 EFCAB2Q5VUJ9 269 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 CXXC5Q7LFL8 322 aaKnown RBP7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 CPA6Q8N4T0 437 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 TTLL6Q8N841 843 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 FBXO15Q8NCQ5 510 aaPredicted RBP7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 JPH3Q8WXH2 748 aaPredicted RBP7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 TSR2Q969E8 191 aaKnown RBP7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 C8orf48Q96LL4 319 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 RHOBTB2Q9BYZ6 727 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 GEMIN8Q9NWZ8 242 aaKnown RBP7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 ANKRD6Q9Y2G4 727 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 GPR45Q9Y5Y3 372 aa7.15□□□□□ -1.26
CKS1BP1-201ENST00000555221 MAFO75444 373 aaPredicted RBP7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 GLRBP48167 497 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 SLC5A3P53794 718 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 MAP3K12Q12852 859 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 NOLC1Q14978 699 aaKnown RBP eCLIP7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 LRRC41Q15345 812 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 STILQ15468 1287 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 TOR2AQ5JU69 321 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 LRSAM1Q6UWE0 723 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 MYPNQ86TC9 1320 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 IGDCC3Q8IVU1 814 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 WDR75Q8IWA0 830 aaKnown RBP7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 MYO1HQ8N1T3 1032 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 KYQ8NBH2 561 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 AUTS2Q8WXX7 1259 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 GORASP1Q9BQQ3 440 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 C11orf84Q9BUA3 381 aaPredicted RBP7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 QRSL1Q9H0R6 528 aaKnown RBP7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 MTG2Q9H4K7 406 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 ZNF277Q9NRM2 450 aaPredicted RBP7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 ZFP69BQ9UJL9 534 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 DENND2AQ9ULE3 1009 aa7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 PNMA8BQ9ULN7 279 aaPredicted RBP7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDHGA12O60330 932 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 CHGBP05060 677 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PFKMP08237 780 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 AGXTP21549 392 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 MTNR1BP49286 362 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 FOXO4P98177 505 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 SRSF2Q01130 221 aaKnown RBP7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 FAM102BQ5T8I3 360 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 NXNQ6DKJ4 435 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 UNQ6494/PRO21346Q6UXR6 183 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 KCNK18Q7Z418 384 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 NUP88Q99567 741 aaPredicted RBP7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 TACO1Q9BSH4 297 aaKnown RBP7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PITHD1Q9GZP4 211 aaPredicted RBP7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 KCTD10Q9H3F6 313 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 KCMF1Q9P0J7 381 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 EDARQ9UNE0 448 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDHGA9Q9Y5G4 932 aaKnown RBP7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDHGA8Q9Y5G5 932 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDHGA7Q9Y5G6 932 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDHGA6Q9Y5G7 932 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDHGA3Q9Y5H0 932 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDHGA2Q9Y5H1 932 aa7.13□□□□□ -1.27
CKS1BP1-201ENST00000555221 PCDH8O95206 1070 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 LPLP06858 475 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 EPHB3P54753 998 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 IL13RA1P78552 427 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 ADAM9Q13443 819 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 SPIDRQ14159 915 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 CCDC178Q5BJE1 867 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 KANK2Q63ZY3 851 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 CXorf57Q6NSI4 855 aaKnown RBP7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 TCEAL8Q8IYN2 117 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 CMTR2Q8IYT2 770 aaKnown RBP7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 LINC00482Q8N8I6 264 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 CDYL2Q8N8U2 506 aa7.12□□□□□ -1.27
CKS1BP1-201ENST00000555221 OR14C36Q8NHC7 312 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms