RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 B4GALT3O60512 393 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 B4GALT4O60513 344 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 RAB11FIP3O75154 756 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 HMGCRP04035 888 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 VIL1P09327 827 aaKnown RBP5.65□□□□□ -1.5
SCFD1-214ENST00000554819 BPIP17213 487 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 CNGA1P29973 690 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 CSF2RBP32927 897 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 ADCY8P40145 1251 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 RGS3P49796 1198 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 KCNQ1P51787 676 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 BCAR1P56945 870 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 PHC1P78364 1004 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 EIF4HQ15056 248 aaKnown RBP5.65□□□□□ -1.5
SCFD1-214ENST00000554819 ZNF568Q3ZCX4 644 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 ATP13A4Q4VNC1 1196 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 ZMAT1Q5H9K5 638 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 PRAMEF9Q5VWM5 478 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 ESRP1Q6NXG1 681 aaKnown RBP5.65□□□□□ -1.5
SCFD1-214ENST00000554819 ARHGEF18Q6ZSZ5 1173 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 UBR7Q8N806 425 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 ZNF610Q8N9Z0 462 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 RTF1Q92541 710 aaKnown RBP5.65□□□□□ -1.5
SCFD1-214ENST00000554819 C20orf173Q96LM9 149 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 ADAM7Q9H2U9 754 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 SPC25Q9HBM1 224 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 EMC7Q9NPA0 242 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 DUSP10Q9Y6W6 482 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 SBNO2Q9Y2G9 1366 aa5.65□□□□□ -1.51
SCFD1-214ENST00000554819 ULK1O75385 1050 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 MEOX1P50221 254 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 PPP2CBP62714 309 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 PPP2CAP67775 309 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 ADCY2Q08462 1091 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 STRN3Q13033 797 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 LILRA6Q6PI73 481 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 RELTQ969Z4 430 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 ZMAT4Q9H898 229 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 KCMF1Q9P0J7 381 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 KCNG1Q9UIX4 513 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 CDC42EP3Q9UKI2 254 aa5.64□□□□□ -1.51
SCFD1-214ENST00000554819 APOBEC2Q9Y235 224 aaKnown RBP5.64□□□□□ -1.51
SCFD1-214ENST00000554819 LAMTOR5O43504 91 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 DNAJC6O75061 913 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 PRPF6O94906 941 aaKnown RBP5.63□□□□□ -1.51
SCFD1-214ENST00000554819 NOLC1Q14978 699 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCFD1-214ENST00000554819 TERF2Q15554 542 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 DDB1Q16531 1140 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 DGKDQ16760 1214 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 TRIM68Q6AZZ1 485 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 KIAA1841Q6NSI8 718 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 FRMD7Q6ZUT3 714 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 ESPNLQ6ZVH7 1005 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 GPR155Q7Z3F1 870 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 RTKN2Q8IZC4 609 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 CXorf38Q8TB03 319 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 SLC5A5Q92911 643 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 JADE2Q9NQC1 790 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 SAE1Q9UBE0 346 aaPredicted RBP5.63□□□□□ -1.51
SCFD1-214ENST00000554819 MSRAQ9UJ68 235 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 SYNPO2Q9UMS6 1093 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCFD1-214ENST00000554819 VWA7Q9Y334 891 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 SLC4A7Q9Y6M7 1214 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 ZNF536O15090 1300 aa5.63□□□□□ -1.51
SCFD1-214ENST00000554819 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-214ENST00000554819 NEMP1O14524 444 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 PRICKLE3O43900 615 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-214ENST00000554819 APOL3O95236 402 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 PLATP00750 562 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 ZNF888P0CJ79 500 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-214ENST00000554819 CANXP27824 592 aaKnown RBP5.62□□□□□ -1.51
SCFD1-214ENST00000554819 SESN2P58004 480 aaPredicted RBP5.62□□□□□ -1.51
SCFD1-214ENST00000554819 NFKB2Q00653 900 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 MYBPC3Q14896 1274 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 BROXQ5VW32 411 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 KANSL1Q7Z3B3 1105 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 FILIP1Q7Z7B0 1213 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 STRA8Q7Z7C7 330 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 RASSF3Q86WH2 238 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 POFUT1Q9H488 388 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 SEC61A2Q9H9S3 476 aa5.62□□□□□ -1.51
SCFD1-214ENST00000554819 NOC2LQ9Y3T9 749 aaKnown RBP5.62□□□□□ -1.51
SCFD1-214ENST00000554819 ST20-MTHFSA0A0A6YYL1 179 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 EPHB4P54760 987 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 RRADP55042 308 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 SESN3P58005 492 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 FAPQ12884 760 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 TBC1D10BQ4KMP7 808 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-214ENST00000554819 SLFN13Q68D06 897 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 USP30Q70CQ3 517 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 BMP8AQ7Z5Y6 402 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 GFM2Q969S9 779 aaKnown RBP5.61□□□□□ -1.51
SCFD1-214ENST00000554819 MYL10Q9BUA6 226 aa5.61□□□□□ -1.51
SCFD1-214ENST00000554819 CNOT11Q9UKZ1 510 aaKnown RBP5.61□□□□□ -1.51
SCFD1-214ENST00000554819 NPEPPSL1A6NEC2 478 aa5.6□□□□□ -1.51
SCFD1-214ENST00000554819 FOXD2O60548 495 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms