RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ABCB11O95342 1321 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 DLATP10515 647 aaKnown RBP12.88□□□□□ -0.35
XRCC3-208ENST00000554811 MYL7Q01449 175 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 PPP1R7Q15435 360 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 MEI1Q5TIA1 1274 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 SLC35G2Q8TBE7 412 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 RBM46Q8TBY0 533 aaKnown RBP12.88□□□□□ -0.35
XRCC3-208ENST00000554811 IQCDQ96DY2 449 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
XRCC3-208ENST00000554811 JPH2Q9BR39 696 aaPredicted RBP12.88□□□□□ -0.35
XRCC3-208ENST00000554811 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 TAS2R14Q9NYV8 317 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 TMOD2Q9NZR1 351 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 DCDC2CA8MYV0 355 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 MSH4O15457 936 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 CCDC50Q8IVM0 306 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 NR2E1Q9Y466 385 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 ROBO1Q9Y6N7 1651 aa12.88□□□□□ -0.35
XRCC3-208ENST00000554811 ESYT2A0FGR8 921 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 CTNND1O60716 968 aaKnown RBP12.87□□□□□ -0.35
XRCC3-208ENST00000554811 PPP1R37O75864 691 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 LRRC14Q15048 493 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 ZKSCAN8Q15776 578 aaPredicted RBP12.87□□□□□ -0.35
XRCC3-208ENST00000554811 PPP4R3AQ6IN85 833 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 NLRP14Q86W24 1093 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 NEUROG2Q9H2A3 272 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 BCL9LQ86UU0 1499 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 FRMD3A2A2Y4 597 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 RAD17O75943 681 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 FGFR4P22455 802 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 CDK17Q00537 523 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 PNMA8AQ86V59 439 aaPredicted RBP12.87□□□□□ -0.35
XRCC3-208ENST00000554811 ZNF473Q8WTR7 871 aaKnown RBP12.87□□□□□ -0.35
XRCC3-208ENST00000554811 ZNF577Q9BSK1 485 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 THAP2Q9H0W7 228 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.353e-16■■■■■ 45.7
XRCC3-208ENST00000554811 PLCB1Q9NQ66 1216 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 TBK1Q9UHD2 729 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 PNMA2Q9UL42 364 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 USTQ9Y2C2 406 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 PSMC2P35998 433 aaKnown RBP12.87□□□□□ -0.35
XRCC3-208ENST00000554811 DDR1Q08345 913 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 ACER1Q8TDN7 264 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 SLC20A1Q8WUM9 679 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 BICD1Q96G01 975 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 FMO2Q99518 471 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 PARVGQ9HBI0 331 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
XRCC3-208ENST00000554811 EDIL3O43854 480 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 ACSL3O95573 720 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 POLD1P28340 1107 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 HP1BP3Q5SSJ5 553 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-208ENST00000554811 ICE2Q659A1 982 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 PALB2Q86YC2 1186 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 SEPT12Q8IYM1 358 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 TPCN2Q8NHX9 752 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 TBC1D31Q96DN5 1066 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■■■□ 26
XRCC3-208ENST00000554811 DAAM1Q9Y4D1 1078 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 TIAM2Q8IVF5 1701 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 MMP10P09238 476 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 DR1Q01658 176 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 MAP2K1Q02750 393 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-208ENST00000554811 SAAL1Q96ER3 474 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 PI4KBQ9UBF8 816 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 ASIC3Q9UHC3 531 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-208ENST00000554811 USP20Q9Y2K6 914 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 DDX3XO00571 662 aaKnown RBP eCLIP12.86□□□□□ -0.35
XRCC3-208ENST00000554811 CETN1Q12798 172 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 AOC3Q16853 763 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-208ENST00000554811 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 SLC30A5Q8TAD4 765 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 WHAMMQ8TF30 809 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 ARHGEF26Q96DR7 871 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 KIFC3Q9BVG8 833 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 TYW1Q9NV66 732 aaKnown RBP12.86□□□□□ -0.35
XRCC3-208ENST00000554811 SWAP70Q9UH65 585 aa12.86□□□□□ -0.35
XRCC3-208ENST00000554811 ALAS1P13196 640 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 CHRNA5P30532 468 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 MDH1P40925 334 aaKnown RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 FAM133BQ5BKY9 247 aaKnown RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 DENND2CQ68D51 928 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 KAT5Q92993 513 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 INPP4AQ96PE3 977 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 P2RX7Q99572 595 aaKnown RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 KCTD10Q9H3F6 313 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 HNRNPH3P31942 346 aaKnown RBP12.85□□□□□ -0.35
XRCC3-208ENST00000554811 USP11P51784 963 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 MTM1Q13496 603 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 CBWD6Q4V339 395 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 CBWD3Q5JTY5 395 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 CBWD5Q5RIA9 395 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 FAM102BQ5T8I3 360 aa12.85□□□□□ -0.35
XRCC3-208ENST00000554811 RUFY4Q6ZNE9 571 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms