RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 AAASQ9NRG9 546 aa21.2■□□□□ 0.98
CPSF2-203ENST00000554290 C9IYK1 514 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 GPR32O75388 356 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 CSPG5O95196 566 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 DEXIO95424 95 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 OATP04181 439 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 LTBRP36941 435 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 JAK3P52333 1124 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 LRCH2Q5VUJ6 765 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 EFCAB12Q6NXP0 572 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 FAM177A1Q8N128 213 aaPredicted RBP21.19■□□□□ 0.98
CPSF2-203ENST00000554290 TBCKQ8TEA7 893 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 SLC5A5Q92911 643 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 TEKT3Q9BXF9 490 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 IGFLR1Q9H665 355 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 PRKAG3Q9UGI9 489 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 RAPGEFL1Q9UHV5 662 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 PCDHA4Q9UN74 947 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 AKT3Q9Y243 479 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 PCDHB12Q9Y5F1 795 aa21.19■□□□□ 0.98
CPSF2-203ENST00000554290 GPR37L1O60883 481 aa21.18■□□□□ 0.98
CPSF2-203ENST00000554290 GATMP50440 423 aa21.18■□□□□ 0.98
CPSF2-203ENST00000554290 CLCN3P51790 818 aa21.18■□□□□ 0.98
CPSF2-203ENST00000554290 CAMK1Q14012 370 aa21.18■□□□□ 0.98
CPSF2-203ENST00000554290 SPOUT1Q5T280 376 aaKnown RBP21.18■□□□□ 0.98
CPSF2-203ENST00000554290 FAM228AQ86W67 206 aa21.18■□□□□ 0.98
CPSF2-203ENST00000554290 ATP6V0A4Q9HBG4 840 aa21.18■□□□□ 0.98
CPSF2-203ENST00000554290 TMEM161AQ9NX61 479 aa21.18■□□□□ 0.98
CPSF2-203ENST00000554290 TBKBP1A7MCY6 615 aa21.17■□□□□ 0.98
CPSF2-203ENST00000554290 CHMP2AO43633 222 aa21.17■□□□□ 0.98
CPSF2-203ENST00000554290 NLRP11P59045 1033 aaKnown RBP21.17■□□□□ 0.98
CPSF2-203ENST00000554290 PRKCEQ02156 737 aa21.17■□□□□ 0.98
CPSF2-203ENST00000554290 Q4G0T1 1027 aa21.17■□□□□ 0.98
CPSF2-203ENST00000554290 GALNT17Q6IS24 598 aa21.17■□□□□ 0.98
CPSF2-203ENST00000554290 BLIDQ8IZY5 108 aa21.17■□□□□ 0.98
CPSF2-203ENST00000554290 RDM1Q8NG50 284 aa21.17■□□□□ 0.98
CPSF2-203ENST00000554290 POF1BQ8WVV4 589 aa21.17■□□□□ 0.98
CPSF2-203ENST00000554290 ELAC1Q9H777 363 aaKnown RBP21.17■□□□□ 0.98
CPSF2-203ENST00000554290 EDIL3O43854 480 aa21.16■□□□□ 0.98
CPSF2-203ENST00000554290 ZNF862O60290 1169 aa21.16■□□□□ 0.98
CPSF2-203ENST00000554290 ALADP13716 330 aa21.16■□□□□ 0.98
CPSF2-203ENST00000554290 DNAJB1P25685 340 aa21.16■□□□□ 0.98
CPSF2-203ENST00000554290 FAM189BP81408 668 aa21.16■□□□□ 0.98
CPSF2-203ENST00000554290 ADAM15Q13444 863 aa21.16■□□□□ 0.98
CPSF2-203ENST00000554290 FAM102BQ5T8I3 360 aa21.16■□□□□ 0.98
CPSF2-203ENST00000554290 UPF3BQ9BZI7 483 aaKnown RBP21.16■□□□□ 0.98
CPSF2-203ENST00000554290 UNC45AQ9H3U1 944 aa21.16■□□□□ 0.98
CPSF2-203ENST00000554290 CYP3A7-CYP3A51PA0A087WV96 503 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 PSMD10O75832 226 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 ZSCAN20P17040 1043 aaPredicted RBP21.15■□□□□ 0.98
CPSF2-203ENST00000554290 EIF4BP23588 611 aaKnown RBP21.15■□□□□ 0.98
CPSF2-203ENST00000554290 CYP3A7P24462 503 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 GTF2F1P35269 517 aaKnown RBP eCLIP21.15■□□□□ 0.98
CPSF2-203ENST00000554290 UBE3AQ05086 875 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 DLX2Q07687 328 aaPredicted RBP21.15■□□□□ 0.98
CPSF2-203ENST00000554290 TBC1D8BQ0IIM8 1120 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 STK3Q13188 491 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 DSC3Q14574 896 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 CLUL1Q15846 466 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 CSPP1Q1MSJ5 1256 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 MIER3Q7Z3K6 550 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 ADHFE1Q8IWW8 467 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 LRRC71Q8N4P6 559 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 LINC01465Q8N7H1 131 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 DAGLBQ8NCG7 672 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 SCLT1Q96NL6 688 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 LARP6Q9BRS8 491 aaKnown RBP21.15■□□□□ 0.98
CPSF2-203ENST00000554290 ADAMTS10Q9H324 1103 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 PDRG1Q9NUG6 133 aa21.15■□□□□ 0.98
CPSF2-203ENST00000554290 LOXHD1Q8IVV2 1947 aa21.14■□□□□ 0.98
CPSF2-203ENST00000554290 HOXA2O43364 376 aa21.14■□□□□ 0.97
CPSF2-203ENST00000554290 NDUFV1P49821 464 aa21.14■□□□□ 0.97
CPSF2-203ENST00000554290 ZP2Q05996 745 aa21.14■□□□□ 0.97
CPSF2-203ENST00000554290 NONOQ15233 471 aaKnown RBP eCLIP21.14■□□□□ 0.97
CPSF2-203ENST00000554290 SMAD2Q15796 467 aaKnown RBP21.14■□□□□ 0.97
CPSF2-203ENST00000554290 UGCGQ16739 394 aa21.14■□□□□ 0.97
CPSF2-203ENST00000554290 MICAL1Q8TDZ2 1067 aa21.14■□□□□ 0.97
CPSF2-203ENST00000554290 CD207Q9UJ71 328 aa21.14■□□□□ 0.97
CPSF2-203ENST00000554290 HCN4Q9Y3Q4 1203 aa21.14■□□□□ 0.97
CPSF2-203ENST00000554290 M0R2N6 131 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 LINC01565O15544 149 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 MBTPS2O43462 519 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 TBX10O75333 385 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 CDKL5O76039 1030 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 TDP2O95551 362 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 FGFR1P11362 822 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 IRS1P35568 1242 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 NRIP1P48552 1158 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 CDC42EP1Q00587 391 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 SMAD4Q13485 552 aaKnown RBP21.13■□□□□ 0.97
CPSF2-203ENST00000554290 XKR3Q5GH77 459 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 MOXD1Q6UVY6 613 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 KRT25Q7Z3Z0 450 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 THNSL1Q8IYQ7 743 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 EFHBQ8N7U6 833 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 GJA10Q969M2 543 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 POP1Q99575 1024 aaKnown RBP21.13■□□□□ 0.97
CPSF2-203ENST00000554290 TMEM117Q9H0C3 514 aa21.13■□□□□ 0.97
CPSF2-203ENST00000554290 TYW1Q9NV66 732 aaKnown RBP21.13■□□□□ 0.97
CPSF2-203ENST00000554290 MYH9P35579 1960 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms