RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 FAM174AQ8TBP5 190 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 RSAD2Q8WXG1 361 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 ACSF2Q96CM8 615 aaPredicted RBP9.83□□□□□ -0.84
PRIM1-208ENST00000552590 CDK15Q96Q40 435 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 MEIS3Q99687 375 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 ARMT1Q9H993 441 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 ZSCAN32Q9NX65 697 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 FBXO4Q9UKT5 387 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 PCDHB12Q9Y5F1 795 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 HCFC2Q9Y5Z7 792 aa9.83□□□□□ -0.84
PRIM1-208ENST00000552590 MIA3Q5JRA6 1907 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 TMEM8BA6NDV4 472 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 PDE6AP16499 860 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 SPINK2P20155 84 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 SPOUT1Q5T280 376 aaKnown RBP9.82□□□□□ -0.84
PRIM1-208ENST00000552590 PDE12Q6L8Q7 609 aaKnown RBP9.82□□□□□ -0.84
PRIM1-208ENST00000552590 KIAA1841Q6NSI8 718 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 PHLDB3Q6NSJ2 640 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 PRR23CQ6ZRP0 262 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 SEPT14Q6ZU15 432 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 STK11IPQ8N1F8 1099 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 CHURC1Q8WUH1 139 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 STAG1Q8WVM7 1258 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 TCF25Q9BQ70 676 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 ENTPD7Q9NQZ7 604 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 SEMA4GQ9NTN9 838 aa9.82□□□□□ -0.84
PRIM1-208ENST00000552590 TLR7Q9NYK1 1049 aaKnown RBP9.82□□□□□ -0.84
PRIM1-208ENST00000552590 TEX15Q9BXT5 2789 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 CAND2O75155 1236 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 RASA1P20936 1047 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 PTPRNQ16849 979 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 SLC9C2Q5TAH2 1124 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 LYPD4Q6UWN0 246 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 FAM160B2Q86V87 743 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 THNSL1Q8IYQ7 743 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 GMCL1P1Q8NEA9 526 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 PJA1Q8NG27 643 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 ADAM32Q8TC27 787 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 LINC01599Q8WXQ3 324 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 ZCCHC14Q8WYQ9 949 aaKnown RBP9.81□□□□□ -0.84
PRIM1-208ENST00000552590 MAP4K1Q92918 833 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 MKL1Q969V6 931 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 DBNLQ9UJU6 430 aaKnown RBP9.81□□□□□ -0.84
PRIM1-208ENST00000552590 HDAC5Q9UQL6 1122 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 DENND4AQ7Z401 1863 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 ZNF532Q9HCE3 1301 aa9.81□□□□□ -0.84
PRIM1-208ENST00000552590 CHRNA1P02708 482 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 HOXD8P13378 290 aaPredicted RBP9.8□□□□□ -0.84
PRIM1-208ENST00000552590 KCNH2Q12809 1159 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 NR5A1Q13285 461 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 FAM26DQ5JW98 314 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 TMED8Q6PL24 325 aaPredicted RBP9.8□□□□□ -0.84
PRIM1-208ENST00000552590 TSSK4Q6SA08 328 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 RUFY4Q6ZNE9 571 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 OTOP3Q7RTS5 596 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 AMOTL1Q8IY63 956 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 GPR152Q8TDT2 470 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 BBC3Q96PG8 261 aaPredicted RBP9.8□□□□□ -0.84
PRIM1-208ENST00000552590 MPHOSPH6Q99547 160 aaKnown RBP9.8□□□□□ -0.84
PRIM1-208ENST00000552590 ARHGEF3Q9NR81 526 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 ATP8A2Q9NTI2 1148 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 IGSF9Q9P2J2 1179 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 PRR12Q9ULL5 1215 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 PATJQ8NI35 1801 aa9.8□□□□□ -0.84
PRIM1-208ENST00000552590 IGKV6D-41A0A0C4DH26 115 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 TM4SF5O14894 197 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 SORBS3O60504 671 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 ZMYND10O75800 440 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 ICAM1P05362 532 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 NR3C2P08235 984 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 IBSPP21815 317 aaPredicted RBP9.79□□□□□ -0.84
PRIM1-208ENST00000552590 HOXC8P31273 242 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 MTX1Q13505 466 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 LPIN1Q14693 890 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 CCDC6Q16204 474 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 RNF207Q6ZRF8 634 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 KCTD1Q719H9 257 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 RTN4RL1Q86UN2 441 aaPredicted RBP9.79□□□□□ -0.84
PRIM1-208ENST00000552590 NPAS4Q8IUM7 802 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 PPTC7Q8NI37 304 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 SSH1Q8WYL5 1049 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 NELL1Q92832 810 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 CEP95Q96GE4 821 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 CCDC8Q9H0W5 538 aaPredicted RBP9.79□□□□□ -0.84
PRIM1-208ENST00000552590 RNPEPQ9H4A4 650 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 EHMT1Q9H9B1 1298 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 RAB23Q9ULC3 237 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 KIAA1217Q5T5P2 1943 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 ACACAQ13085 2346 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 TCRBV5S4A2TA0A5A2 114 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 LRP3O75074 770 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 MBD4O95243 580 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 KCNK5O95279 499 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 TOP3BO95985 862 aaKnown RBP9.79□□□□□ -0.84
PRIM1-208ENST00000552590 RETP07949 1114 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 SMIM10L2AP0DMW4 78 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 SMIM10L2BP0DMW5 78 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 MCCP23508 829 aa9.79□□□□□ -0.84
PRIM1-208ENST00000552590 RPS6P62753 249 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms