RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 RNF169Q8NCN4 708 aa12.48□□□□□ -0.41
ATF1-204ENST00000552487 CLP1Q92989 425 aaKnown RBP12.48□□□□□ -0.41
ATF1-204ENST00000552487 P2RX5Q93086 422 aa12.48□□□□□ -0.41
ATF1-204ENST00000552487 INO80BQ9C086 356 aaPredicted RBP12.48□□□□□ -0.41
ATF1-204ENST00000552487 IGFLR1Q9H665 355 aa12.48□□□□□ -0.41
ATF1-204ENST00000552487 DDX25Q9UHL0 483 aaKnown RBP12.48□□□□□ -0.41
ATF1-204ENST00000552487 PUF60Q9UHX1 559 aaKnown RBP12.48□□□□□ -0.41
ATF1-204ENST00000552487 CARNS1A5YM72 827 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 H3BQ06 376 aaPredicted RBP12.47□□□□□ -0.41
ATF1-204ENST00000552487 MSH4O15457 936 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 C22orf31O95567 290 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 MMP1P03956 469 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 GCFC2P16383 781 aaKnown RBP12.47□□□□□ -0.41
ATF1-204ENST00000552487 LAG3P18627 525 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 COL9A1P20849 921 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 CLCN3P51790 818 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 EVCP57679 992 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 NLRP11P59045 1033 aaKnown RBP12.47□□□□□ -0.41
ATF1-204ENST00000552487 LETM2Q2VYF4 491 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 TMEM31Q5JXX7 168 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 GCOM2Q9BZD3 368 aaPredicted RBP12.47□□□□□ -0.41
ATF1-204ENST00000552487 ERVK-5Q9HDB9 667 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 DACT1Q9NYF0 836 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 ST3GAL5Q9UNP4 418 aa12.47□□□□□ -0.41
ATF1-204ENST00000552487 NOC2LQ9Y3T9 749 aaKnown RBP12.47□□□□□ -0.41
ATF1-204ENST00000552487 MRPL42Q9Y6G3 142 aaKnown RBP12.47□□□□□ -0.41
ATF1-204ENST00000552487 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 BDP1A6H8Y1 2624 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 MICAL3Q7RTP6 2002 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 DHX15O43143 795 aaKnown RBP12.46□□□□□ -0.41
ATF1-204ENST00000552487 ALADP13716 330 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 SFPQP23246 707 aaKnown RBP eCLIP12.46□□□□□ -0.41
ATF1-204ENST00000552487 CA8P35219 290 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 PPM1AP35813 382 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 KRT17Q04695 432 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 NTRK3Q16288 839 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 MTERF2Q49AM1 385 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 Q4G0T1 1027 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 XKR3Q5GH77 459 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 MOXD1Q6UVY6 613 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 NEK8Q86SG6 692 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 GJD3Q8N144 294 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 LRRC71Q8N4P6 559 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 SLC7A3Q8WY07 619 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 ALG13Q9NP73 1137 aaKnown RBP12.46□□□□□ -0.41
ATF1-204ENST00000552487 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.41
ATF1-204ENST00000552487 TRANK1O15050 2925 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 COL4A6Q14031 1691 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 DOCK5Q9H7D0 1870 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 GRM6O15303 877 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 SKIP12755 728 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 EIF4BP23588 611 aaKnown RBP12.45□□□□□ -0.42
ATF1-204ENST00000552487 ANAPC15P60006 121 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 PSMC5P62195 406 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 UBE3AQ05086 875 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 TOB2Q14106 344 aaPredicted RBP12.45□□□□□ -0.42
ATF1-204ENST00000552487 INF2Q27J81 1249 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 ERICH6BQ5W0A0 696 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 PDE12Q6L8Q7 609 aaKnown RBP12.45□□□□□ -0.42
ATF1-204ENST00000552487 LRRC43Q8N309 656 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 KLHL23Q8NBE8 558 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 DAGLBQ8NCG7 672 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 CRYGNQ8WXF5 182 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 ZNF689Q96CS4 500 aaPredicted RBP12.45□□□□□ -0.42
ATF1-204ENST00000552487 FAM20AQ96MK3 541 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
ATF1-204ENST00000552487 MRPL9Q9BYD2 267 aaKnown RBP12.45□□□□□ -0.42
ATF1-204ENST00000552487 UNC45AQ9H3U1 944 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 TLE6Q9H808 572 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 ENTPD7Q9NQZ7 604 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 RGS18Q9NS28 235 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 PRKAG3Q9UGI9 489 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 PLAGL2Q9UPG8 496 aa12.45□□□□□ -0.42
ATF1-204ENST00000552487 COL4A4P53420 1690 aaPredicted RBP12.45□□□□□ -0.42
ATF1-204ENST00000552487 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.44□□□□□ -0.42
ATF1-204ENST00000552487 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 CCNT1O60563 726 aaKnown RBP12.44□□□□□ -0.42
ATF1-204ENST00000552487 TDP2O95551 362 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 POLGP54098 1239 aaPredicted RBP12.44□□□□□ -0.42
ATF1-204ENST00000552487 NCBP1Q09161 790 aaKnown RBP12.44□□□□□ -0.42
ATF1-204ENST00000552487 SAFBQ15424 915 aaKnown RBP eCLIP12.44□□□□□ -0.42
ATF1-204ENST00000552487 CLUL1Q15846 466 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 TWF2Q6IBS0 349 aaKnown RBP12.44□□□□□ -0.42
ATF1-204ENST00000552487 OTUD6AQ7L8S5 288 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 FAM228AQ86W67 206 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 POF1BQ8WVV4 589 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 LINC01599Q8WXQ3 324 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 RSPH1Q8WYR4 309 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 TMEM117Q9H0C3 514 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 ELAC1Q9H777 363 aaKnown RBP12.44□□□□□ -0.42
ATF1-204ENST00000552487 TLR9Q9NR96 1032 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
ATF1-204ENST00000552487 CD207Q9UJ71 328 aa12.44□□□□□ -0.42
ATF1-204ENST00000552487 STK36Q9NRP7 1315 aa12.43□□□□□ -0.42
ATF1-204ENST00000552487 KRT2P35908 639 aa12.43□□□□□ -0.42
ATF1-204ENST00000552487 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms