RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 TMEM173Q86WV6 379 aaPredicted RBP11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 SLC39A11Q8N1S5 342 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 ADAM2Q99965 735 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 CELF4Q9BZC1 486 aaKnown RBP11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 ZNF215Q9UL58 517 aaPredicted RBP11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 NOC2LQ9Y3T9 749 aaKnown RBP11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
SLC48A1-209ENST00000552003 SDK1Q7Z5N4 2213 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 GSTTP1A0A1W2PQM5 241 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 RAB11FIP3O75154 756 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 CXCL14O95715 111 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 CENPBP07199 599 aaPredicted RBP11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 SRFP11831 508 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 IGBP1P78318 339 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 NFX1Q12986 1120 aaKnown RBP11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 RRP12Q5JTH9 1297 aaKnown RBP11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 CCDC149Q6ZUS6 474 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 NETO1Q8TDF5 533 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 TRAPPC12Q8WVT3 735 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 INPP4AQ96PE3 977 aaPredicted RBP11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 MYADMQ96S97 322 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 VAT1LQ9HCJ6 419 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 DZANK1Q9NVP4 752 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 RTEL1Q9NZ71 1219 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 FBXO4Q9UKT5 387 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 PCDHGA2Q9Y5H1 932 aa11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 BAZ2BQ9UIF8 2168 aaKnown RBP11.85□□□□□ -0.51
SLC48A1-209ENST00000552003 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 NT5C1B-RDH14C9J2C7 533 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 ZFYP08048 801 aaPredicted RBP11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 RFX1P22670 979 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 CCND2P30279 289 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 STARD6P59095 220 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 NEDD9Q14511 834 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 LETM2Q2VYF4 491 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 GPATCH4Q5T3I0 446 aaKnown RBP11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 IER5Q5VY09 327 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 SLC24A5Q71RS6 500 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 ZNF558Q96NG5 402 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 PCYT2Q99447 389 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 RPP25Q9BUL9 199 aaKnown RBP11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 ZBP1Q9H171 429 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 ECHDC1Q9NTX5 307 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 SPG21Q9NZD8 308 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 BPTFQ12830 3046 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 KDM3AQ9Y4C1 1321 aa11.84□□□□□ -0.51
SLC48A1-209ENST00000552003 IGSF10Q6WRI0 2623 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 EVPLQ92817 2033 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 ATP9AO75110 1047 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 INSRRP14616 1297 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 NCLP19338 710 aaKnown RBP11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 KRT17Q04695 432 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 LPAL2Q16609 132 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 SLC35G1Q2M3R5 365 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 DCLRE1AQ6PJP8 1040 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 LRSAM1Q6UWE0 723 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 FTSJ3Q8IY81 847 aaKnown RBP11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 PANK1Q8TE04 598 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 BCL7CQ8WUZ0 217 aaPredicted RBP11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 ATRIPQ8WXE1 791 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 TTC14Q96N46 770 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 ZKSCAN3Q9BRR0 538 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 VN1R3Q9BXE9 311 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 SPATA6Q9NWH7 488 aaPredicted RBP11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 TMEM161AQ9NX61 479 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 ZSCAN32Q9NX65 697 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 ST3GAL5Q9UNP4 418 aa11.83□□□□□ -0.52
SLC48A1-209ENST00000552003 MYH15Q9Y2K3 1946 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 TM4SF5O14894 197 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 CA8P35219 290 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 DSC3Q14574 896 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 PTPN14Q15678 1187 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 CABP7Q86V35 215 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 DDX23Q9BUQ8 820 aaKnown RBP11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 TMEM117Q9H0C3 514 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 EPS15L1Q9UBC2 864 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 PCDHA2Q9Y5H9 948 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 PCDHA1Q9Y5I3 950 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 IRAK3Q9Y616 596 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 FRMPD4Q14CM0 1322 aa11.82□□□□□ -0.52
SLC48A1-209ENST00000552003 LAMTOR5O43504 91 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 TBC1D4O60343 1298 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 TDGF1P13385 188 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 PPM1AP35813 382 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 KRT76Q01546 638 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 RING1Q06587 406 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 CLLU1OSQ5K130 101 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 VPS52Q8N1B4 723 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
SLC48A1-209ENST00000552003 KDF1Q8NAX2 398 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms