RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 WNT16Q9UBV4 365 aa13.69□□□□□ -0.22
PTCH1-222ENST00000551425 UBIAD1Q9Y5Z9 338 aa13.69□□□□□ -0.22
PTCH1-222ENST00000551425 MAFGO15525 162 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 MTMR1Q13613 665 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 BMS1Q14692 1282 aaKnown RBP13.68□□□□□ -0.22
PTCH1-222ENST00000551425 KIAA0319LQ8IZA0 1049 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 DCLK2Q8N568 766 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 JPH1Q9HDC5 661 aaPredicted RBP13.68□□□□□ -0.22
PTCH1-222ENST00000551425 IGSF9Q9P2J2 1179 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 RCAN3Q9UKA8 241 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 GINS2Q9Y248 185 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 IRAK3Q9Y616 596 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
PTCH1-222ENST00000551425 CXCL14O95715 111 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 SP9P0CG40 484 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 SDHBP21912 280 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 KLRC1P26715 233 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 TBC1D8BQ0IIM8 1120 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 IMMTQ16891 758 aaKnown RBP13.67□□□□□ -0.22
PTCH1-222ENST00000551425 CCDC149Q6ZUS6 474 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 GPR149Q86SP6 731 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 SLC22A17Q8WUG5 538 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
PTCH1-222ENST00000551425 PKD2L1Q9P0L9 805 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 SLC9A2Q9UBY0 812 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 PCDHB15Q9Y5E8 787 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 CHD6Q8TD26 2715 aa13.67□□□□□ -0.22
PTCH1-222ENST00000551425 KRBA1A5PL33 1030 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 STK25O00506 426 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 EPCAMP16422 314 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 SLC26A2P50443 739 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 STAT5BP51692 787 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 CRYBB1P53674 252 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-222ENST00000551425 GIT2Q14161 759 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 TMC5Q6UXY8 1006 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 CABP7Q86V35 215 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 FAM228AQ86W67 206 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 ABI1Q8IZP0 508 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 SUMF1Q8NBK3 374 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 DSCC1Q9BVC3 393 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 JADE2Q9NQC1 790 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 LOXHD1Q8IVV2 1947 aa13.66□□□□□ -0.22
PTCH1-222ENST00000551425 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-222ENST00000551425 NARSO43776 548 aaKnown RBP13.65□□□□□ -0.22
PTCH1-222ENST00000551425 SDSP20132 328 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 POLGP54098 1239 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-222ENST00000551425 ACTR2P61160 394 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 TROAPQ12815 778 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 ST3GAL2Q16842 350 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 ANKRD45Q5TZF3 282 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 PHLDB3Q6NSJ2 640 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 CYB5R4Q7L1T6 521 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 FEZF2Q8TBJ5 459 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 BORCS6Q96GS4 357 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 ZBP1Q9H171 429 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 SFXN1Q9H9B4 322 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 DLGAP2Q9P1A6 1054 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-222ENST00000551425 DENND4AQ7Z401 1863 aa13.65□□□□□ -0.22
PTCH1-222ENST00000551425 HBP1O60381 514 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 CFHP08603 1231 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 CTSAP10619 480 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 CA8P35219 290 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 ALDH7A1P49419 539 aaKnown RBP13.64□□□□□ -0.23
PTCH1-222ENST00000551425 ATXN1P54253 815 aaKnown RBP13.64□□□□□ -0.23
PTCH1-222ENST00000551425 KIZQ2M2Z5 673 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 CLLU1OSQ5K130 101 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 KIAA0319Q5VV43 1072 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 PPFIBP1Q86W92 1011 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 ECHDC2Q86YB7 292 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 C1orf210Q8IVY1 113 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 GPR161Q8N6U8 529 aaKnown RBP13.64□□□□□ -0.23
PTCH1-222ENST00000551425 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 OSMRQ99650 979 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 TBC1D17Q9HA65 648 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 CACNA1GO43497 2377 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 CFAP47Q6ZTR5 3102 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 NFASCO94856 1347 aa13.64□□□□□ -0.23
PTCH1-222ENST00000551425 COL1A2P08123 1366 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 IGKV6D-21A0A0A0MT36 114 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 GPR32O75388 356 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 ATG7O95352 703 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 RFX1P22670 979 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.23
PTCH1-222ENST00000551425 BCAR1P56945 870 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 NONOQ15233 471 aaKnown RBP eCLIP13.63□□□□□ -0.23
PTCH1-222ENST00000551425 LETM2Q2VYF4 491 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 C15orf39Q6ZRI6 1047 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 PIBF1Q8WXW3 757 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 AUTS2Q8WXX7 1259 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 RILPL2Q969X0 211 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 TMEM169Q96HH4 297 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 SDF4Q9BRK5 362 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 SPZ1Q9BXG8 430 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 MRPL9Q9BYD2 267 aaKnown RBP13.63□□□□□ -0.23
PTCH1-222ENST00000551425 KCNH7Q9NS40 1196 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 SIT1Q9Y3P8 196 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 GPR179Q6PRD1 2367 aa13.63□□□□□ -0.23
PTCH1-222ENST00000551425 CARNS1A5YM72 827 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms